BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3550.1
(106 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010277322.1 PREDICTED: pentatricopeptide repeat-containing pr... 79 4e-15
CBI31119.3 unnamed protein product, partial [Vitis vinifera] 75 1e-13
XP_002265420.1 PREDICTED: pentatricopeptide repeat-containing pr... 75 1e-13
>XP_010277322.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera] XP_010277323.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera] XP_010277324.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera] XP_010277325.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera] XP_010277326.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera]
Length = 539
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 45/56 (80%)
Query: 51 LSLVEEGLRFFKSMNEVYGIELRIEHYGCTVDLLGQARMLDEAKKLVSEMHMQSNS 106
+ LVEEGLRFF SM EVY I +EHYGC VDLLG+A ML+EAKK+V+EM M+ +S
Sbjct: 357 MGLVEEGLRFFNSMTEVYAINPGVEHYGCLVDLLGRAGMLEEAKKVVTEMPMEPDS 412
>CBI31119.3 unnamed protein product, partial [Vitis vinifera]
Length = 512
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 51 LSLVEEGLRFFKSMNEVYGIELRIEHYGCTVDLLGQARMLDEAKKLVSEMHMQSNS 106
+ LVEEGLR FKSM +YGIE ++HYGC VDLLG+A ML++AK++V EM ++ +S
Sbjct: 334 VGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDS 389
>XP_002265420.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646695.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646696.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646697.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646698.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646699.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646700.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 51 LSLVEEGLRFFKSMNEVYGIELRIEHYGCTVDLLGQARMLDEAKKLVSEMHMQSNS 106
+ LVEEGLR FKSM +YGIE ++HYGC VDLLG+A ML++AK++V EM ++ +S
Sbjct: 359 VGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDS 414