BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3590.1
(137 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN70933.1 hypothetical protein VITISV_032482 [Vitis vinifera] 181 2e-56
XP_007042754.1 MED32, putative [Theobroma cacao] EOX98585.1 MED3... 181 5e-56
XP_003631633.1 PREDICTED: mediator of RNA polymerase II transcri... 179 1e-55
>CAN70933.1 hypothetical protein VITISV_032482 [Vitis vinifera]
Length = 145
Score = 181 bits (458), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 92/119 (77%), Positives = 99/119 (83%), Gaps = 4/119 (3%)
Query: 19 CQKTSIAESALENFKQKWELFRVACDQAEEFVVSVKQRIGSECLVDEATGSSATTNGKLG 78
QKT+ ++ALENFKQ+WELFRVACDQAEEFV SVKQRIGSECLVDEATGS A GK G
Sbjct: 31 AQKTAATDAALENFKQRWELFRVACDQAEEFVESVKQRIGSECLVDEATGSVA---GKPG 87
Query: 79 QTMTTTGLPPISAVRLEQMSEAVRWLVIELQQGSGVNGAASHNQSSVPFDARFSEDAGQ 137
Q + TTGLPPISAVRLEQMS+AVRWLVIELQ GSG G SH+ S PFDARFSEDA Q
Sbjct: 88 QAV-TTGLPPISAVRLEQMSKAVRWLVIELQHGSGTAGGPSHSHVSAPFDARFSEDAAQ 145
>XP_007042754.1 MED32, putative [Theobroma cacao] EOX98585.1 MED32, putative
[Theobroma cacao]
Length = 186
Score = 181 bits (460), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 91/119 (76%), Positives = 98/119 (82%), Gaps = 4/119 (3%)
Query: 19 CQKTSIAESALENFKQKWELFRVACDQAEEFVVSVKQRIGSECLVDEATGSSATTNGKLG 78
QKT+ ++ALEN KQKWELFRVACDQAEEFV S+KQRIGSECLVDEATGS A GK G
Sbjct: 72 AQKTAATDAALENLKQKWELFRVACDQAEEFVESIKQRIGSECLVDEATGSMA---GKSG 128
Query: 79 QTMTTTGLPPISAVRLEQMSEAVRWLVIELQQGSGVNGAASHNQSSVPFDARFSEDAGQ 137
Q + TTGLPPISAVRLEQMS+AVRWLVIELQ GSG G A+H S PFDARFSEDA Q
Sbjct: 129 QAL-TTGLPPISAVRLEQMSKAVRWLVIELQHGSGSAGGAAHAHPSAPFDARFSEDAAQ 186
>XP_003631633.1 PREDICTED: mediator of RNA polymerase II transcription subunit 32
[Vitis vinifera]
Length = 145
Score = 179 bits (454), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 91/119 (76%), Positives = 98/119 (82%), Gaps = 4/119 (3%)
Query: 19 CQKTSIAESALENFKQKWELFRVACDQAEEFVVSVKQRIGSECLVDEATGSSATTNGKLG 78
QKT+ ++ALENFKQ+WELFRVACDQAEEFV SVKQRIGSECLVDEATGS A GK G
Sbjct: 31 AQKTAATDAALENFKQRWELFRVACDQAEEFVESVKQRIGSECLVDEATGSVA---GKPG 87
Query: 79 QTMTTTGLPPISAVRLEQMSEAVRWLVIELQQGSGVNGAASHNQSSVPFDARFSEDAGQ 137
Q + T GLPPISAVRLEQMS+AVRWLVIELQ GSG G SH+ S PFDARFSEDA Q
Sbjct: 88 QAV-TAGLPPISAVRLEQMSKAVRWLVIELQHGSGTAGGPSHSHVSAPFDARFSEDAAQ 145