BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3630.1
(244 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010277322.1 PREDICTED: pentatricopeptide repeat-containing pr... 382 e-128
CBI31119.3 unnamed protein product, partial [Vitis vinifera] 372 e-124
XP_002265420.1 PREDICTED: pentatricopeptide repeat-containing pr... 372 e-124
>XP_010277322.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera] XP_010277323.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera] XP_010277324.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera] XP_010277325.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera] XP_010277326.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera]
Length = 539
Score = 382 bits (981), Expect = e-128, Method: Compositional matrix adjust.
Identities = 182/238 (76%), Positives = 210/238 (88%)
Query: 1 MYAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVT 60
MY+KCGCI+TARQVFNEM ERDV+ FTSMISGL+NHG+S SAIELF++M ++GV PNEVT
Sbjct: 287 MYSKCGCIDTARQVFNEMPERDVYTFTSMISGLSNHGQSASAIELFVEMQKEGVKPNEVT 346
Query: 61 FICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSEM 120
FICVLSACSRMGLVEEG+RFF SM EVY I P +EHYGC+VDLLGRAGML+EAKK+V+EM
Sbjct: 347 FICVLSACSRMGLVEEGLRFFNSMTEVYAINPGVEHYGCLVDLLGRAGMLEEAKKVVTEM 406
Query: 121 TMEPDSYVLGALLNACRMHGDVELGKEMVERLAGRSLNHGGVHVLLSNMYASANRWEDVA 180
MEPDSYVLGALLNACR+HG+VELGKE V L RSL+HGGVHVLLSN+YASAN+WE V
Sbjct: 407 PMEPDSYVLGALLNACRVHGNVELGKETVGSLMDRSLDHGGVHVLLSNIYASANQWEVVE 466
Query: 181 KVRKKMEDKNVKKVPGCSLIEVDCVVSEFVAGDRSHDLMDDIVSVLLLINNQLKSSRF 238
VRK ME+KNV+KVPGCSLIEVD VV EF+AGD+SH +M+DI+ +LL IN QLKS F
Sbjct: 467 MVRKGMEEKNVRKVPGCSLIEVDGVVHEFIAGDKSHFVMEDIMLLLLGINKQLKSFGF 524
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 84/151 (55%), Gaps = 6/151 (3%)
Query: 2 YAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVTF 61
Y K G +E ARQ+F +M ER+ ++++MI+G A G+ + ++ELF +M G PN
Sbjct: 187 YCKSGQLEIARQLFEKMPERNAVSWSAMITGYAQVGKFRESLELFNEMQHAGFQPNHAGI 246
Query: 62 ICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSEMT 121
+ LSAC+ +G +++G R+ + + +E +VD+ + G +D A+++ +EM
Sbjct: 247 VGALSACAFLGALDQG-RWIHAYVDRNKMELDRILGTALVDMYSKCGCIDTARQVFNEMP 305
Query: 122 MEPDSYVLGALLNACRMHGD----VELGKEM 148
E D Y ++++ HG +EL EM
Sbjct: 306 -ERDVYTFTSMISGLSNHGQSASAIELFVEM 335
>CBI31119.3 unnamed protein product, partial [Vitis vinifera]
Length = 512
Score = 372 bits (954), Expect = e-124, Method: Compositional matrix adjust.
Identities = 178/235 (75%), Positives = 206/235 (87%)
Query: 1 MYAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVT 60
MYAKCGC+ETA +VF+EM +RDVFAFTS+ISGLANHG S +AIE+F +M +GV PNEVT
Sbjct: 264 MYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVT 323
Query: 61 FICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSEM 120
FIC+LSACSR+GLVEEG+R FKSM +YGIEP ++HYGC+VDLLGRAGML++AK++V EM
Sbjct: 324 FICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREM 383
Query: 121 TMEPDSYVLGALLNACRMHGDVELGKEMVERLAGRSLNHGGVHVLLSNMYASANRWEDVA 180
+EPDSYVLGALLNACR+HGDVELGKE VE LA RSL+HGGVHVLLSNMYASAN+WEDVA
Sbjct: 384 PLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVA 443
Query: 181 KVRKKMEDKNVKKVPGCSLIEVDCVVSEFVAGDRSHDLMDDIVSVLLLINNQLKS 235
KVRK ME+K VKKVPGCSLIEVD V EFVAGD SH MD+IV +LL I+ LKS
Sbjct: 444 KVRKGMEEKKVKKVPGCSLIEVDGAVFEFVAGDMSHVFMDEIVLLLLGIDKHLKS 498
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 2/151 (1%)
Query: 2 YAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVTF 61
YAK G + ARQ+F+EM E++ ++++MI+G A G + A+ELF M G PN
Sbjct: 164 YAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAI 223
Query: 62 ICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSEMT 121
+ L+AC+ +G +++G ++ + I ++D+ + G ++ A ++ EM
Sbjct: 224 VGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTA-LIDMYAKCGCVETACRVFDEM- 281
Query: 122 MEPDSYVLGALLNACRMHGDVELGKEMVERL 152
++ D + +L++ HG EM R+
Sbjct: 282 LDRDVFAFTSLISGLANHGHSATAIEMFTRM 312
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 36/191 (18%)
Query: 1 MYAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVT 60
+YA C C+++AR++F+ RDV +T++I+G A G+ A +LF +M E N V+
Sbjct: 132 LYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPE----KNAVS 187
Query: 61 FICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSEM 120
+ +++ +++GL E + F M ++ G P+ +G +V L
Sbjct: 188 WSAMITGYAQIGLFREALELFNDM-QIAGFRPN---HGAIVGALTACAF----------- 232
Query: 121 TMEPDSYVLGALLNACRMHGDVELGKEMVERLAGRSLNHGGVHVLLSNMYASANRWEDVA 180
LGAL +H V+ + +++R+ G + L +MYA E
Sbjct: 233 --------LGALDQGRWIHAYVDRNRMVLDRILGTA---------LIDMYAKCGCVETAC 275
Query: 181 KVRKKMEDKNV 191
+V +M D++V
Sbjct: 276 RVFDEMLDRDV 286
>XP_002265420.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646695.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646696.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646697.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646698.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646699.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646700.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 372 bits (955), Expect = e-124, Method: Compositional matrix adjust.
Identities = 178/235 (75%), Positives = 206/235 (87%)
Query: 1 MYAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVT 60
MYAKCGC+ETA +VF+EM +RDVFAFTS+ISGLANHG S +AIE+F +M +GV PNEVT
Sbjct: 289 MYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVT 348
Query: 61 FICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSEM 120
FIC+LSACSR+GLVEEG+R FKSM +YGIEP ++HYGC+VDLLGRAGML++AK++V EM
Sbjct: 349 FICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREM 408
Query: 121 TMEPDSYVLGALLNACRMHGDVELGKEMVERLAGRSLNHGGVHVLLSNMYASANRWEDVA 180
+EPDSYVLGALLNACR+HGDVELGKE VE LA RSL+HGGVHVLLSNMYASAN+WEDVA
Sbjct: 409 PLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVA 468
Query: 181 KVRKKMEDKNVKKVPGCSLIEVDCVVSEFVAGDRSHDLMDDIVSVLLLINNQLKS 235
KVRK ME+K VKKVPGCSLIEVD V EFVAGD SH MD+IV +LL I+ LKS
Sbjct: 469 KVRKGMEEKKVKKVPGCSLIEVDGAVFEFVAGDMSHVFMDEIVLLLLGIDKHLKS 523
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 2/151 (1%)
Query: 2 YAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVTF 61
YAK G + ARQ+F+EM E++ ++++MI+G A G + A+ELF M G PN
Sbjct: 189 YAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAI 248
Query: 62 ICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSEMT 121
+ L+AC+ +G +++G ++ + I ++D+ + G ++ A ++ EM
Sbjct: 249 VGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTA-LIDMYAKCGCVETACRVFDEM- 306
Query: 122 MEPDSYVLGALLNACRMHGDVELGKEMVERL 152
++ D + +L++ HG EM R+
Sbjct: 307 LDRDVFAFTSLISGLANHGHSATAIEMFTRM 337
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 36/191 (18%)
Query: 1 MYAKCGCIETARQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVNPNEVT 60
+YA C C+++AR++F+ RDV +T++I+G A G+ A +LF +M E N V+
Sbjct: 157 LYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPE----KNAVS 212
Query: 61 FICVLSACSRMGLVEEGMRFFKSMNEVYGIEPSIEHYGCMVDLLGRAGMLDEAKKLVSEM 120
+ +++ +++GL E + F M ++ G P+ +G +V L
Sbjct: 213 WSAMITGYAQIGLFREALELFNDM-QIAGFRPN---HGAIVGALTACAF----------- 257
Query: 121 TMEPDSYVLGALLNACRMHGDVELGKEMVERLAGRSLNHGGVHVLLSNMYASANRWEDVA 180
LGAL +H V+ + +++R+ G + L +MYA E
Sbjct: 258 --------LGALDQGRWIHAYVDRNRMVLDRILGTA---------LIDMYAKCGCVETAC 300
Query: 181 KVRKKMEDKNV 191
+V +M D++V
Sbjct: 301 RVFDEMLDRDV 311