BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3660.1
(129 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CBI31119.3 unnamed protein product, partial [Vitis vinifera] 172 3e-49
XP_002265420.1 PREDICTED: pentatricopeptide repeat-containing pr... 172 5e-49
XP_008227868.1 PREDICTED: pentatricopeptide repeat-containing pr... 168 2e-47
>CBI31119.3 unnamed protein product, partial [Vitis vinifera]
Length = 512
Score = 172 bits (437), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/117 (77%), Positives = 97/117 (82%), Gaps = 1/117 (0%)
Query: 1 MSKEPDSYELLGALRNACRMHGDVELGKEMVERLACRSLDHGGVHVLLSNMYASANRWED 60
M EPDSY +LGAL NACR+HGDVELGKE VE LA RSLDHGGVHVLLSNMYASAN+WED
Sbjct: 383 MPLEPDSY-VLGALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWED 441
Query: 61 VAKVRKKMENKIVKKVPGCSLIEVDCVVSEFVAGDRSHHLMDDIVSVLLLINNQLKS 117
VAKVRK ME K VKKVPGCSLIEVD V EFVAGD SH MD+IV +LL I+ LKS
Sbjct: 442 VAKVRKGMEEKKVKKVPGCSLIEVDGAVFEFVAGDMSHVFMDEIVLLLLGIDKHLKS 498
>XP_002265420.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646695.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646696.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646697.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646698.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646699.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646700.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 172 bits (437), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 91/117 (77%), Positives = 97/117 (82%), Gaps = 1/117 (0%)
Query: 1 MSKEPDSYELLGALRNACRMHGDVELGKEMVERLACRSLDHGGVHVLLSNMYASANRWED 60
M EPDSY +LGAL NACR+HGDVELGKE VE LA RSLDHGGVHVLLSNMYASAN+WED
Sbjct: 408 MPLEPDSY-VLGALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWED 466
Query: 61 VAKVRKKMENKIVKKVPGCSLIEVDCVVSEFVAGDRSHHLMDDIVSVLLLINNQLKS 117
VAKVRK ME K VKKVPGCSLIEVD V EFVAGD SH MD+IV +LL I+ LKS
Sbjct: 467 VAKVRKGMEEKKVKKVPGCSLIEVDGAVFEFVAGDMSHVFMDEIVLLLLGIDKHLKS 523
>XP_008227868.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Prunus mume]
Length = 526
Score = 168 bits (426), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 85/123 (69%), Positives = 100/123 (81%), Gaps = 1/123 (0%)
Query: 1 MSKEPDSYELLGALRNACRMHGDVELGKEMVERLACRSLDHGGVHVLLSNMYASANRWED 60
M EPDSY +LGAL NACR+HGDVELGKEMVERL+ +SLDH GVHVLLSN+YASAN+W+D
Sbjct: 399 MPMEPDSY-VLGALLNACRVHGDVELGKEMVERLSGKSLDHSGVHVLLSNIYASANQWDD 457
Query: 61 VAKVRKKMENKIVKKVPGCSLIEVDCVVSEFVAGDRSHHLMDDIVSVLLLINNQLKSSKF 120
V +RK ME K V+KVPGCSL+EVD V EFVAGDRSH LMD+I+ L+I+ LKS F
Sbjct: 458 VTVLRKGMEEKKVRKVPGCSLVEVDGEVFEFVAGDRSHVLMDEIMLASLVIDKHLKSRCF 517
Query: 121 DEE 123
D +
Sbjct: 518 DRD 520