BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3720.1
(196 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010277322.1 PREDICTED: pentatricopeptide repeat-containing pr... 274 7e-87
CBI31119.3 unnamed protein product, partial [Vitis vinifera] 263 7e-83
XP_002265420.1 PREDICTED: pentatricopeptide repeat-containing pr... 263 9e-83
>XP_010277322.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera] XP_010277323.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera] XP_010277324.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera] XP_010277325.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera] XP_010277326.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera]
Length = 539
Score = 274 bits (700), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 148/175 (84%), Gaps = 5/175 (2%)
Query: 22 GSKRESKTLLKVMPGNRPELAGIKPNHAGIVGALTACGFLGALDQGKWIHSYVDRNKIKL 81
G RES L N + AG +PNHAGIVGAL+AC FLGALDQG+WIH+YVDRNK++L
Sbjct: 222 GKFRESLELF-----NEMQHAGFQPNHAGIVGALSACAFLGALDQGRWIHAYVDRNKMEL 276
Query: 82 DRILGTALIDMYAKCCCIETASQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMG 141
DRILGTAL+DMY+KC CI+TA QVFNEM ERDV+ FTSMISGL+NHG+S SAIELF++M
Sbjct: 277 DRILGTALVDMYSKCGCIDTARQVFNEMPERDVYTFTSMISGLSNHGQSASAIELFVEMQ 336
Query: 142 EDGVSPNEVTFICVLSACSRMGLVEEGMRFFKSMNEVYGIEPRIEHYGCMVDLLG 196
++GV PNEVTFICVLSACSRMGLVEEG+RFF SM EVY I P +EHYGC+VDLLG
Sbjct: 337 KEGVKPNEVTFICVLSACSRMGLVEEGLRFFNSMTEVYAINPGVEHYGCLVDLLG 391
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%)
Query: 82 DRILGTALIDMYAKCCCIETASQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMG 141
D I TA+I Y K +E A Q+F +M ER+ ++++MI+G A G+ + ++ELF +M
Sbjct: 176 DVISWTAVISGYCKSGQLEIARQLFEKMPERNAVSWSAMITGYAQVGKFRESLELFNEMQ 235
Query: 142 EDGVSPNEVTFICVLSACSRMGLVEEG 168
G PN + LSAC+ +G +++G
Sbjct: 236 HAGFQPNHAGIVGALSACAFLGALDQG 262
>CBI31119.3 unnamed protein product, partial [Vitis vinifera]
Length = 512
Score = 263 bits (671), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 117/160 (73%), Positives = 140/160 (87%)
Query: 37 NRPELAGIKPNHAGIVGALTACGFLGALDQGKWIHSYVDRNKIKLDRILGTALIDMYAKC 96
N ++AG +PNH IVGALTAC FLGALDQG+WIH+YVDRN++ LDRILGTALIDMYAKC
Sbjct: 209 NDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKC 268
Query: 97 CCIETASQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVSPNEVTFICVL 156
C+ETA +VF+EM +RDVFAFTS+ISGLANHG S +AIE+F +M +GV PNEVTFIC+L
Sbjct: 269 GCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLL 328
Query: 157 SACSRMGLVEEGMRFFKSMNEVYGIEPRIEHYGCMVDLLG 196
SACSR+GLVEEG+R FKSM +YGIEP ++HYGC+VDLLG
Sbjct: 329 SACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLG 368
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 23 SKRESKTLLKVMPGNRPELAGIKPNHAGIVGALTACGFLGALDQGKWIHSYVDRNKIKLD 82
K+E T+L + G PN+ L AC L L G +H+ R +
Sbjct: 65 DKKEPATVLSLYKYMLS--TGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAY 122
Query: 83 RILGTALIDMYAKCCCIETASQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGE 142
+ L+ +YA C C+++A ++F+ RDV +T++I+G A G+ A +LF +M E
Sbjct: 123 DFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPE 182
Query: 143 DGVSPNEVTFICVLSACSRMGLVEEGMRFFKSMNEVYGIEP 183
N V++ +++ +++GL E + F M ++ G P
Sbjct: 183 ----KNAVSWSAMITGYAQIGLFREALELFNDM-QIAGFRP 218
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 54/90 (60%)
Query: 79 IKLDRILGTALIDMYAKCCCIETASQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFI 138
+ D + TA+I+ YAK + A Q+F+EM E++ ++++MI+G A G + A+ELF
Sbjct: 150 VNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFN 209
Query: 139 KMGEDGVSPNEVTFICVLSACSRMGLVEEG 168
M G PN + L+AC+ +G +++G
Sbjct: 210 DMQIAGFRPNHGAIVGALTACAFLGALDQG 239
>XP_002265420.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646695.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646696.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646697.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646698.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646699.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera] XP_010646700.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 263 bits (672), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 117/160 (73%), Positives = 140/160 (87%)
Query: 37 NRPELAGIKPNHAGIVGALTACGFLGALDQGKWIHSYVDRNKIKLDRILGTALIDMYAKC 96
N ++AG +PNH IVGALTAC FLGALDQG+WIH+YVDRN++ LDRILGTALIDMYAKC
Sbjct: 234 NDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKC 293
Query: 97 CCIETASQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVSPNEVTFICVL 156
C+ETA +VF+EM +RDVFAFTS+ISGLANHG S +AIE+F +M +GV PNEVTFIC+L
Sbjct: 294 GCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLL 353
Query: 157 SACSRMGLVEEGMRFFKSMNEVYGIEPRIEHYGCMVDLLG 196
SACSR+GLVEEG+R FKSM +YGIEP ++HYGC+VDLLG
Sbjct: 354 SACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLG 393
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 5/141 (3%)
Query: 43 GIKPNHAGIVGALTACGFLGALDQGKWIHSYVDRNKIKLDRILGTALIDMYAKCCCIETA 102
G PN+ L AC L L G +H+ R + + L+ +YA C C+++A
Sbjct: 108 GFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSA 167
Query: 103 SQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFIKMGEDGVSPNEVTFICVLSACSRM 162
++F+ RDV +T++I+G A G+ A +LF +M E N V++ +++ +++
Sbjct: 168 RRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPE----KNAVSWSAMITGYAQI 223
Query: 163 GLVEEGMRFFKSMNEVYGIEP 183
GL E + F M ++ G P
Sbjct: 224 GLFREALELFNDM-QIAGFRP 243
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 54/90 (60%)
Query: 79 IKLDRILGTALIDMYAKCCCIETASQVFNEMSERDVFAFTSMISGLANHGRSKSAIELFI 138
+ D + TA+I+ YAK + A Q+F+EM E++ ++++MI+G A G + A+ELF
Sbjct: 175 VNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFN 234
Query: 139 KMGEDGVSPNEVTFICVLSACSRMGLVEEG 168
M G PN + L+AC+ +G +++G
Sbjct: 235 DMQIAGFRPNHGAIVGALTACAFLGALDQG 264