BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3750.1
(808 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AFB73912.1 polyprotein [Citrus sinensis] 1253 0.0
AFB73911.1 polyprotein [Citrus sinensis] 1251 0.0
ACL97386.1 Gag-Pol polyprotein [Medicago truncatula] 1157 0.0
>AFB73912.1 polyprotein [Citrus sinensis]
Length = 1309
Score = 1253 bits (3241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/805 (73%), Positives = 688/805 (85%), Gaps = 9/805 (1%)
Query: 1 MAAKYDIEKFNGNNFSLWKMKMKAILRKDNCLAAIEDRRVDMLDDAKWNEIDGNAIANLH 60
MAAKY+IEKFNGNNFSLWKMKMKA+LRK+NCLAAI +R +++ DD KWNE+D NAI++LH
Sbjct: 1 MAAKYEIEKFNGNNFSLWKMKMKAVLRKNNCLAAIGERPMEITDD-KWNEVDSNAISDLH 59
Query: 61 LALADGVLSSVAEKASAKEIWDTLTKLYETKSLHNKIFLKRRLYTLRMMESTTVTNHINT 120
LALADGVLSSVAEK +AKEIWDTLTKLYE KSLHNKIFLKR+LYTLRM EST VT+HINT
Sbjct: 60 LALADGVLSSVAEKNTAKEIWDTLTKLYEAKSLHNKIFLKRKLYTLRMAESTMVTDHINT 119
Query: 121 LNTLFSQLTSIGHNMDTVERGEILLQSLPDSYDQLIINITTN--IEVLSFDDIAAAVLEE 178
L TLFSQLT++GHN++ ER E+LLQSLPDSYDQLIIN+T N ++ L FDD+AA+VL E
Sbjct: 120 LKTLFSQLTTLGHNIEENERAELLLQSLPDSYDQLIINLTNNNPVDSLVFDDVAASVLNE 179
Query: 179 ENRRKNKEDRQESSQHAEALTMMRGRSMERGSSGSQKQSRSKSRSKKNVKCHYCGKKGHY 238
E+RRKNKE+RQ SSQ AEAL++ RGRS ERG SGSQ RSKSRSKKNVKC+ CGKKGH
Sbjct: 180 ESRRKNKENRQASSQQAEALSVTRGRSTERGPSGSQNHGRSKSRSKKNVKCYNCGKKGHV 239
Query: 239 KRECW-NLKKKEGKSPELSNAQGCVAGTSDEGEILYSEATTVHEGRRNFAEIWLMDSGAT 297
K+ECW N K++EGK PE SNAQGCVA TSD+GEILYSEAT V EGR+ +++WL+DSGAT
Sbjct: 240 KKECWSNQKRREGKEPESSNAQGCVASTSDDGEILYSEATIVSEGRKRLSDVWLIDSGAT 299
Query: 298 WHMTPRREWFHQYEPTSGGSVYMGDDHFVEIAGIGSIKLKMYDGTVRTIQEVRHVKGLKK 357
WHMT RREWFH YEP SGGSVYMG+DH +EIAGIG+IK+KM+DGT+RTI+EVRHV GLKK
Sbjct: 300 WHMTSRREWFHTYEPISGGSVYMGNDHALEIAGIGTIKIKMFDGTIRTIEEVRHVNGLKK 359
Query: 358 NLLSVGQLDSLGCKTHIEGGKMKVIKGALVIMKEEKIAANMYMLQGETQQEGEVSVASTS 417
NLLS+GQ+DS GCKTH+E G MK++KGALV+MK EKI AN++ML+GET QE + VAS
Sbjct: 360 NLLSLGQMDSHGCKTHVENGIMKIVKGALVLMKAEKICANLFMLKGETLQEADACVASNG 419
Query: 418 SIEESTNIWHQKLGHISEQGMKILVEQNLLPGLKNVSLPFCEHCVTSKQHRLKFSSSNAR 477
EEST +WH KLGH+SEQG+KIL E+ L PGLK+VSLPFCEHCVTSKQHRLKFS S AR
Sbjct: 420 --EESTMMWHLKLGHMSEQGLKILSERKLPPGLKSVSLPFCEHCVTSKQHRLKFSRSIAR 477
Query: 478 SKTILELVHSDVWQSPVISLGGARYFVSFIDDYSRRCWVFPIKRKADVFPVFKNFKAQIE 537
SK IL+L+HSDVW+SP IS+GGA+Y V+FIDDYSRRCWV+PIK+K+DVFPVFK +KA +E
Sbjct: 478 SKCILDLIHSDVWESPDISMGGAKYMVTFIDDYSRRCWVYPIKKKSDVFPVFKEYKAWVE 537
Query: 538 LESEKKIKCLRSDNGGEYTGIEFDTFCQEEGIKRQFTVAYTPQQNGVAERMNRTLLEGTR 597
LES KKIKCLR+DNGGEYT EF FC++EGI+RQFTVAYTPQQNGVAERMNRTL E R
Sbjct: 538 LESGKKIKCLRTDNGGEYTDSEFLAFCKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIR 597
Query: 598 AMLRAAGMDKSFWAEAVKTACYVINRSPSTAIDLKTPMQMWTGKPADYSRLHMFGSPVYV 657
AMLR AG+ SFWAEA KTACY++NRSPSTAI LKT M+MWTGKPADYS LH FG PVYV
Sbjct: 598 AMLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKPADYSYLHAFGCPVYV 657
Query: 658 MYNAQETSKLDSKSRRCIFLGYADGVKGYRLWDPTAHKVIISRDVIFTEDKVHT---NDS 714
MYNAQE +KLD KSR+CIFLGYADGVKGYRLWDPTAHK++ISRDVIF ED++ +D
Sbjct: 658 MYNAQERTKLDPKSRKCIFLGYADGVKGYRLWDPTAHKIVISRDVIFVEDQLQRKDGDDG 717
Query: 715 TSNEKPETSTVHVRYEQEDQNSSEAELEHKEREEAETETPLIRQSTRERREPAWHSNYFM 774
T EK ET V+V E+ +SSEA EH+E+E E+E P +R+STRERR P WHS Y
Sbjct: 718 TVKEKSETVPVYVENNPENSDSSEAAPEHEEQEPVESEAPEVRRSTRERRPPTWHSEYVT 777
Query: 775 EGNIAYCLLTEDGEPSTYHEAIKAM 799
E N+AYCLLTEDGEPST+HEA+ ++
Sbjct: 778 EINVAYCLLTEDGEPSTFHEALNSL 802
>AFB73911.1 polyprotein [Citrus sinensis]
Length = 1309
Score = 1251 bits (3238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/804 (73%), Positives = 688/804 (85%), Gaps = 9/804 (1%)
Query: 1 MAAKYDIEKFNGNNFSLWKMKMKAILRKDNCLAAIEDRRVDMLDDAKWNEIDGNAIANLH 60
MAAKY+IEKFNGNNFSLWKMKMKA+LRK+NCLAAI +R +++ DD KWNE+DGNAI++LH
Sbjct: 1 MAAKYEIEKFNGNNFSLWKMKMKAVLRKNNCLAAIGERPMEITDD-KWNEVDGNAISDLH 59
Query: 61 LALADGVLSSVAEKASAKEIWDTLTKLYETKSLHNKIFLKRRLYTLRMMESTTVTNHINT 120
LALADGVLSSVAEK +AKEIWDTLTKLYE KSLHNKIFLKR+LYTLRM EST VT+HINT
Sbjct: 60 LALADGVLSSVAEKNTAKEIWDTLTKLYEAKSLHNKIFLKRKLYTLRMAESTMVTDHINT 119
Query: 121 LNTLFSQLTSIGHNMDTVERGEILLQSLPDSYDQLIINITTN--IEVLSFDDIAAAVLEE 178
L TLFSQLT++GHN++ ER E+LLQSLPDSYDQLIIN+T N +E L FDD+AA+VL E
Sbjct: 120 LKTLFSQLTTLGHNIEENERAELLLQSLPDSYDQLIINLTNNNPVESLVFDDVAASVLNE 179
Query: 179 ENRRKNKEDRQESSQHAEALTMMRGRSMERGSSGSQKQSRSKSRSKKNVKCHYCGKKGHY 238
E+RRKNKE+RQ SSQ AEAL++ RGRS ERG SGSQ Q RSK R KKNVKC+ CGKKGH
Sbjct: 180 ESRRKNKENRQASSQQAEALSVTRGRSTERGPSGSQNQGRSKFRGKKNVKCYNCGKKGHV 239
Query: 239 KRECW-NLKKKEGKSPELSNAQGCVAGTSDEGEILYSEATTVHEGRRNFAEIWLMDSGAT 297
K+ECW N K++EGK PE SNAQGCVA TSD+GEILYSEATTV EGR+ +++WL+DSGAT
Sbjct: 240 KKECWSNQKRREGKEPETSNAQGCVASTSDDGEILYSEATTVSEGRKRLSDVWLIDSGAT 299
Query: 298 WHMTPRREWFHQYEPTSGGSVYMGDDHFVEIAGIGSIKLKMYDGTVRTIQEVRHVKGLKK 357
WHMT RREWFH YEP SGGSVYMG+DH +EIAGIG+IK+KM+DGT+RTI EVRHV GLKK
Sbjct: 300 WHMTSRREWFHTYEPISGGSVYMGNDHALEIAGIGTIKIKMFDGTIRTIGEVRHVNGLKK 359
Query: 358 NLLSVGQLDSLGCKTHIEGGKMKVIKGALVIMKEEKIAANMYMLQGETQQEGEVSVASTS 417
NLLS+GQ+DS G KTH+E G MK++KGALV+MK EKI AN++ML+GET QE + VAS
Sbjct: 360 NLLSLGQMDSHGYKTHVENGIMKIVKGALVLMKVEKIGANLFMLKGETLQEADACVASNG 419
Query: 418 SIEESTNIWHQKLGHISEQGMKILVEQNLLPGLKNVSLPFCEHCVTSKQHRLKFSSSNAR 477
EEST +WH KLGH+SEQG+KIL E+ LLPGLK+VSLPFCEHCVTSKQHRLKFS S AR
Sbjct: 420 --EESTMMWHLKLGHMSEQGLKILSERKLLPGLKSVSLPFCEHCVTSKQHRLKFSRSIAR 477
Query: 478 SKTILELVHSDVWQSPVISLGGARYFVSFIDDYSRRCWVFPIKRKADVFPVFKNFKAQIE 537
SK IL+L+HSDVW+SP IS+GGA+Y V+FIDDYSRRCWV+PIK+K+DVFPVFK +KA +E
Sbjct: 478 SKCILDLIHSDVWESPDISMGGAKYMVTFIDDYSRRCWVYPIKKKSDVFPVFKEYKAWVE 537
Query: 538 LESEKKIKCLRSDNGGEYTGIEFDTFCQEEGIKRQFTVAYTPQQNGVAERMNRTLLEGTR 597
LES KKIKCLR+DNGGEYT EF FC++EGI+RQFTVAYTPQQNGVAERMNRTL E R
Sbjct: 538 LESGKKIKCLRTDNGGEYTDGEFLAFCKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIR 597
Query: 598 AMLRAAGMDKSFWAEAVKTACYVINRSPSTAIDLKTPMQMWTGKPADYSRLHMFGSPVYV 657
AMLR AG+ SFWAEA KTACY++NRSPSTAI LKT M+MWTGKPADYS LH FG P+YV
Sbjct: 598 AMLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKPADYSYLHAFGCPMYV 657
Query: 658 MYNAQETSKLDSKSRRCIFLGYADGVKGYRLWDPTAHKVIISRDVIFTEDKVHT---NDS 714
MYNAQE +KLD+KSRRCIFLGYADGVKGYRLWDPTAHK++ISRDVIF ED++ +D
Sbjct: 658 MYNAQERTKLDAKSRRCIFLGYADGVKGYRLWDPTAHKIVISRDVIFVEDQLQRKDGDDG 717
Query: 715 TSNEKPETSTVHVRYEQEDQNSSEAELEHKEREEAETETPLIRQSTRERREPAWHSNYFM 774
T EK ET V+V E+ +SSEA EH+E+E E+E P +R+STRERR P WHS Y
Sbjct: 718 TVKEKSETVPVYVENNPENSDSSEAAPEHEEQEPVESEAPEVRRSTRERRPPTWHSEYVT 777
Query: 775 EGNIAYCLLTEDGEPSTYHEAIKA 798
E N+AYCLLTEDGEPST+HEA+ +
Sbjct: 778 EINVAYCLLTEDGEPSTFHEALNS 801
>ACL97386.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 1157 bits (2993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/801 (69%), Positives = 664/801 (82%), Gaps = 11/801 (1%)
Query: 1 MAAKYDIEKFNGNNFSLWKMKMKAILRKDNCLAAIEDRRVDMLDDAKWNEIDGNAIANLH 60
MAAK++IEKFNG NFSLWK+K++AILRKDNCL AI+ R D+ D+ KW E+D NA+ANLH
Sbjct: 1 MAAKFEIEKFNGRNFSLWKLKIRAILRKDNCLDAIDGRLADITDE-KWKEMDDNAVANLH 59
Query: 61 LALADGVLSSVAEKASAKEIWDTLTKLYETKSLHNKIFLKRRLYTLRMMESTTVTNHINT 120
LA+AD VLSS+AEK +AKEIWDTL KLYE KSLHN+IFLKRRLYTL+M EST+VT+HINT
Sbjct: 60 LAMADSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLQMGESTSVTDHINT 119
Query: 121 LNTLFSQLTSIGHNMDTVERGEILLQSLPDSYDQLIINITTN--IEVLSFDDIAAAVLEE 178
LNTLFSQLT+ + ER E+LLQSLPDSYDQLIINIT N + L FDD+A A+LEE
Sbjct: 120 LNTLFSQLTASDFKIAKNERAELLLQSLPDSYDQLIINITNNNIADTLHFDDVAGAILEE 179
Query: 179 ENRRKNKEDRQESSQHAEALTMMRGRSMERGSSGSQKQSRSKSRSKKNVKCHYCGKKGHY 238
E+RRKNKE+R ESS+ AEALTM RGRS ERG SGSQ RSKSR KKN+KC+ CG KGH
Sbjct: 180 ESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRKKNIKCYGCGMKGHV 239
Query: 239 KRECWNLKKKEGKSPELSNAQGCVAGTSDEGEILYSEATTVHEGRRNFAEIWLMDSGATW 298
K+ECWN+KK K+ E S +QGCVA TSD+GEILYSEA T +G R ++W+MDSGATW
Sbjct: 240 KKECWNIKKNGEKNSEASTSQGCVASTSDDGEILYSEAATSSKGERRLNDVWIMDSGATW 299
Query: 299 HMTPRREWFHQYEPTSGGSVYMGDDHFVEIAGIGSIKLKMYDGTVRTIQEVRHVKGLKKN 358
HMTP R+WF+ YEP S GSVYMG+DH +EIAG+G+I+LKM+DGTVR IQ VRHVKGLKKN
Sbjct: 300 HMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGLKKN 359
Query: 359 LLSVGQLDSLGCKTHIEGGKMKVIKGALVIMKEEKIAANMYMLQGETQQEGEVSVASTSS 418
LLSVGQLD LGCK H E G +KV+KG LV+MK EKI +N+YML G+T QE + SVA+ S
Sbjct: 360 LLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQEADASVAAASQ 419
Query: 419 IEESTNIWHQKLGHISEQGMKILVEQNLLPGLKNVSLPFCEHCVTSKQHRLKFSSSNARS 478
EE+T +WHQ+LGH+SE+G+K+LVE+NLL GLK V+LPFCEHCV SKQHRLKF+ RS
Sbjct: 420 -EETTMMWHQRLGHMSERGLKVLVERNLLHGLKTVNLPFCEHCVMSKQHRLKFARVTTRS 478
Query: 479 KTILELVHSDVWQSPVISLGGARYFVSFIDDYSRRCWVFPIKRKADVFPVFKNFKAQIEL 538
K IL+L+HSDVW+SP ISLGGARYFVSFIDDYSRR WV+PIK+K+DVFPVFK FKAQIEL
Sbjct: 479 KHILDLIHSDVWESPEISLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIEL 538
Query: 539 ESEKKIKCLRSDNGGEYTGIEFDTFCQEEGIKRQFTVAYTPQQNGVAERMNRTLLEGTRA 598
E+EKKIKCLR+DNGGEY EF FC++EGI RQFTVA+TPQQNGVAERMNRTLLE TRA
Sbjct: 539 ETEKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRA 598
Query: 599 MLRAAGMDKSFWAEAVKTACYVINRSPSTAIDLKTPMQMWTGKPADYSRLHMFGSPVYVM 658
ML+ AGM KSFWAEA KTACYVINRSPSTAIDLKTPM+MW GKP DYS LH+FG PVYVM
Sbjct: 599 MLKTAGMAKSFWAEAAKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVM 658
Query: 659 YNAQETSKLDSKSRRCIFLGYADGVKGYRLWDPTAHKVIISRDVIFTEDKVHT---NDST 715
YN+QE +KLD KSR+CIFLGYAD VKGYRLWDPTA KV++SRDV+F E+++ + NDST
Sbjct: 659 YNSQEKTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDST 718
Query: 716 SNEKPETSTVHVRYEQEDQNSSEAELEHKEREEAETETPLIRQSTRERREPAWHSNYFME 775
S ET+ V + + ++ +SSEAE H+E+E + +R+STR+ ++P+W S+Y M
Sbjct: 719 SK---ETAIVQMEEKSKESDSSEAESVHEEQEPDDVNDG-VRRSTRQTQKPSWQSDYVMT 774
Query: 776 GNIAYCLLTEDGEPSTYHEAI 796
+ AYCL+TE+GEPST+HEA+
Sbjct: 775 SHDAYCLITEEGEPSTFHEAL 795