BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3810.1
(477 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CDH30699.1 putative Ty1-copia-like retrotransposon [Cercis chine... 243 8e-70
CAN61322.1 hypothetical protein VITISV_012106 [Vitis vinifera] 251 9e-70
XP_010437209.1 PREDICTED: uncharacterized protein LOC104721004 i... 234 2e-68
>CDH30699.1 putative Ty1-copia-like retrotransposon [Cercis chinensis]
Length = 646
Score = 243 bits (620), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 249/475 (52%), Gaps = 74/475 (15%)
Query: 23 STLPTLTNIANLVSIRLDNTNYLLWKSQLLPILHSQDLYKFVNGTYPPPPEFLPSSSESG 82
S LPT ++I+LD N+L+W++QLL I+ + + GT P +++ + +
Sbjct: 36 SNLPTF---GQTLTIKLDRNNFLIWRNQLLNIVVANGYEDILEGTRSCPYQWIAVTDTAS 92
Query: 83 TSVS--LPNPYYAYWYRVDQMLLSWLNATLTEPILTQVLGLTSSRAVWESLERSLSSFNS 140
T+ + NP Y W R +++++SW+ ++LTE ++TQ++ S+ +W +L S +S +
Sbjct: 93 TTHGSVILNPEYVLWQRQNRLVMSWIYSSLTEQMMTQIMAYNSACEIWTALRESYASASR 152
Query: 141 ARLMNLKLQLQTSKKGSLSVSEFLLRLKGITNSLAAIGHPVNDEELVLIILSGLGSEYEG 200
AR+M L+LQLQT++KG LSV +++LR++ I + L AIG V+ ++ V+ +L+GLGSEY
Sbjct: 153 ARIMELRLQLQTTRKGGLSVMDYMLRIQHICDHLRAIGESVSIDDQVMAVLAGLGSEYNP 212
Query: 201 FVTSITTRLIPPTFSEFHSQLRTHEFRLQL---------LQSNVS------------QPT 239
V SIT+RL + S L T+E RL++ LQ+N + Q
Sbjct: 213 IVASITSRLDSISVQALQSYLETYEKRLEIQNSVEQHIPLQANAAMYNSNRGKRKPYQQN 272
Query: 240 AHYSPSPPTS-----FTNSTRGRGRGGYTKSNRGRGAYFGRGNFRPNSSSVLGRPPDRPH 294
H+S +P T+ NS++G RGG+ SN+GR P RP
Sbjct: 273 FHHSQTPVTATHNFNHRNSSQGGFRGGH--SNKGR-----------------ANPGSRPQ 313
Query: 295 LVCQYCGRVGHSARQCYH---------LTRQNDLSSS-------FAALGIESLSPDPHWY 338
CQ C ++GH A +C+H + N SSS AA G+ +P W+
Sbjct: 314 --CQICCKIGHVATECWHRFDNQFQPKASHSNQFSSSAQDPQALMAAPGLLGETP---WF 368
Query: 339 VDSGATSHIASDTASLSSRSDIHSPENVFVGNGSAASVSGVGNYHLTPS---FTLKNVLI 395
+D+GAT H+ SD A+LS + + V VGNG V G+ + S LKNVL
Sbjct: 369 LDTGATHHVTSDLANLSLHNPFSGDDKVIVGNGKGLYVLHTGHSSIPTSQGALLLKNVLH 428
Query: 396 VPSLKKNLISISRLLRDFNCEVVFNRRGFYVQDLLTRKTLLAGTIEDGLFRLSSA 450
VP + NL+S+ +L D N V F F V+D T+ LL G ++ GL+ + SA
Sbjct: 429 VPKIAANLVSVQKLCHDNNAYVEFYPSYFAVKDQKTQAILLKGGLDKGLYSVPSA 483
>CAN61322.1 hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 251 bits (641), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 149/457 (32%), Positives = 245/457 (53%), Gaps = 52/457 (11%)
Query: 22 VSTLPTLTNIANLVSIRLDNTNYLLWKSQLLPILHSQDLYKFVNGTYPPPPEFLPSSSES 81
++++P+ + + + ++LD TNY+LW+SQ+ ++ + F++GT P E
Sbjct: 23 MASIPSYQMLNHTLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSICP--------EK 74
Query: 82 GTSVSLPNPYYAYWYRVDQMLLSWLNATLTEPILTQVLGLTSSRAVWESLERSLSSFNSA 141
S + NP + W R D+ +LSW+ ++LT I+ Q++G +S + W +LE SS + A
Sbjct: 75 DLSPGVMNPAFVAWRRQDRTILSWIYSSLTPGIMAQIIGHNTSHSAWNALESIFSSSSRA 134
Query: 142 RLMNLKLQLQTSKKGSLSVSEFLLRLKGITNSLAAIGHPVNDEELVLIILSGLGSEYEGF 201
R+M L+L+LQ++KKGS+S+ ++++++KG ++LAAIG PV++++ V+ +L GLGS+Y
Sbjct: 135 RIMQLRLELQSTKKGSMSMIDYIMKIKGAADNLAAIGEPVSEQDQVMNLLGGLGSDYNAV 194
Query: 202 VTSITTRLIPPTFSEFHSQLRTHEFRLQLLQSNVSQPTAHYSPSPPTSFTNSTRGRGRGG 261
VT+I R + HS L E RL+ QS++ Q +A+Y+ S RGG
Sbjct: 195 VTAINIRDDKISLEAIHSMLLAFEHRLE-QQSSIEQMSANYASS----------SNNRGG 243
Query: 262 YTKSNRGRGAYFGRGN------------FRPNSSSVLGRPPDRPHLVCQYCGRVGHSARQ 309
K N GRG + N P ++P CQ CG+ GH+A+
Sbjct: 244 GRKFNGGRGQGYSPNNNNYTYRGRGRGGRNGQGGRQNSSPSEKPQ--CQLCGKFGHTAQI 301
Query: 310 CYHLTR------QNDLSSSF---------AALGIESLSP-DPHWYVDSGATSHIASDTAS 353
CYH Q +S S A + S +P D WY+DSGA+ H+ + +
Sbjct: 302 CYHRFDISFQGGQTTISHSLNNGNQNNIPAMVASASNNPADESWYLDSGASHHLTQNLGN 361
Query: 354 LSSRSDIHSPENVFVGNGSAASVSGVGNYHL---TPSFTLKNVLIVPSLKKNLISISRLL 410
L+S S + V +GNG S+S +G+ L T SF LK V VP + NLIS+++
Sbjct: 362 LTSTSPYTGTDKVTIGNGKHLSISNIGSKQLHSHTHSFRLKKVFHVPFISANLISVAKFC 421
Query: 411 RDFNCEVVFNRRGFYVQDLLTRKTLLAGTIEDGLFRL 447
+ N + F+ F+V+DL T+ L G +E+GL++
Sbjct: 422 SENNALIEFHSNAFFVKDLHTKMVLAQGKLENGLYKF 458
>XP_010437209.1 PREDICTED: uncharacterized protein LOC104721004 isoform X1
[Camelina sativa]
Length = 442
Score = 234 bits (597), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/448 (32%), Positives = 243/448 (54%), Gaps = 27/448 (6%)
Query: 13 LSSSLPFSTVSTLPTLTNIANLVSIRLDNTNYLLWKSQLLPILHSQDLYKFVNGTYPPPP 72
++ S PF P ++++ V+I++ + NYLLWK+Q +L Q L FVNGT PP
Sbjct: 1 MADSYPF------PDSIHVSSTVTIKITSNNYLLWKTQFESLLSCQKLIGFVNGTVTAPP 54
Query: 73 EFLPSSSESGTSVS-LPNPYYAYWYRVDQMLLSWLNATLTEPILTQVLGLTSSRAVWESL 131
F +S+ +G S++ +PNP + W+ DQ++ WL TL+E +L V L++SR VW SL
Sbjct: 55 RF--TSTRTGESITEVPNPRFESWFCTDQLIRFWLFGTLSEEVLGYVHTLSTSRDVWMSL 112
Query: 132 ERSLSSFNSARLMNLKLQLQTSKKGSLSVSEFLLRLKGITNSLAAIGHPVNDEELVLIIL 191
+ + + +R L+ L +K ++ + + I ++L++IG P++D + L
Sbjct: 113 AENFNKSSISREFALRRNLWVLEKKDMTFAAYSREFISICDALSSIGKPIDDSMKIFQFL 172
Query: 192 SGLGSEYEGFVTSITT---RLIPPTFSEFHSQLRTHEFRLQLLQSNVSQPTAHYSPSPPT 248
+GLG +Y+ T I + +L PP+F++ S++ + + +L+ + N + H + T
Sbjct: 173 NGLGRDYDPITTVIQSSLGKLSPPSFTDVVSEVDSFDAKLRSYE-NADSVSPHVAFQ--T 229
Query: 249 SFTNSTRGRGRGGYTKSNRGRGAYFGRGNFRPNSSSVLGRPPDRPHLVCQYCGRVGHSAR 308
S+ ++ RG RG NRGRG Y RG + +RP CQ CGR+GH+A
Sbjct: 230 SYGSNNRGNFRGRNRGQNRGRGGYSSRGRGFTQYQTTPTNNGERP--TCQICGRIGHTAA 287
Query: 309 QCYHLTRQN----DLSSSFAALGIESLSPDPHWYVDSGATSHIASDTASLSSRSDIHSPE 364
CY+ N D++ +F +L + + W DSGAT+HI S +L S S +
Sbjct: 288 NCYNRFNNNYQGGDMAQAFNSLYV---TDGNEWVTDSGATAHITSTPTNLQSASSYEGND 344
Query: 365 NVFVGNGSAASVSGVGNYH-LTPS--FTLKNVLIVPSLKKNLISISRLLRDFNCEVVFNR 421
V VG+G+ ++ +G+ +TP+ L VL+ P +KK+L+S+S+L D+ C V F+
Sbjct: 345 VVLVGDGAYLPITHLGSATIITPAGIIPLNEVLVCPEMKKSLLSVSKLCDDYPCGVYFDS 404
Query: 422 RGFYVQDLLTRKTLLAGTIEDGLFRLSS 449
YV D+ +K ++ G DGL+ L +
Sbjct: 405 TNVYVIDIKNQKVVVKGPRSDGLYVLKN 432