BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000058.1_g3840.1
         (189 letters)

Database: ./nr 
           95,329,361 sequences; 35,143,497,570 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABO72547.1 Integrase, catalytic region; Zinc finger, CCHC-type; ...   134   2e-37
KOM38358.1 hypothetical protein LR48_Vigan03g174000 [Vigna angul...   131   3e-35
XP_015382094.1 PREDICTED: uncharacterized mitochondrial protein ...   134   1e-34

>ABO72547.1 Integrase, catalytic region; Zinc finger, CCHC-type;
           Retrotransposon gag protein, putative [Medicago
           truncatula]
          Length = 120

 Score =  134 bits (337), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 62/109 (56%), Positives = 84/109 (77%), Gaps = 3/109 (2%)

Query: 53  GSSPFSWKSKKQHTVAKSFAGAEYRALANLTQELQWLKYLLRDIGIDRSSPMSVHCDNRA 112
            S+P SWK+KKQ T+++S   AEYR+LA L+ ELQWLKYLL D+GI    P++++CD++A
Sbjct: 3   NSNPISWKTKKQPTISRSSIEAEYRSLATLSSELQWLKYLLSDLGIYHPQPITIYCDSQA 62

Query: 113 ALHIADNPVFHERTKHIEIDCHFVRERSRQMLLL---LVSHQQLTNLRT 158
           A+HIA+NPVFHERTKHIEIDCHFVRE+ +  L+    + S  QL ++ T
Sbjct: 63  AIHIAENPVFHERTKHIEIDCHFVREKIKSSLITASYIRSSDQLADIFT 111


>KOM38358.1 hypothetical protein LR48_Vigan03g174000 [Vigna angularis]
          Length = 190

 Score =  131 bits (329), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 64/135 (47%), Positives = 89/135 (65%)

Query: 53  GSSPFSWKSKKQHTVAKSFAGAEYRALANLTQELQWLKYLLRDIGIDRSSPMSVHCDNRA 112
           G++  SWKSKKQ TV+KS + AEYR+LA+LT ELQWL+YLL+D+ I   +P SV+CDN +
Sbjct: 55  GTALISWKSKKQTTVSKSSSEAEYRSLASLTCELQWLQYLLQDLHISCPTPYSVYCDNNS 114

Query: 113 ALHIADNPVFHERTKHIEIDCHFVRERSRQMLLLLVSHQQLTNLRTFSPNLLMPTPSRRY 172
           A+HIA NP FHERTKHI+IDCH  R++ +  L+ L+     + +       L P+P    
Sbjct: 115 AIHIAKNPTFHERTKHIDIDCHVTRQKLQDGLIKLLHVSSTSQVADVFTKSLYPSPFNMV 174

Query: 173 LASWLLSRFLLHLEG 187
            +   +    +HLEG
Sbjct: 175 TSKLNMHNIHVHLEG 189


>XP_015382094.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like,
           partial [Citrus sinensis]
          Length = 370

 Score =  134 bits (337), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 62/93 (66%), Positives = 74/93 (79%)

Query: 53  GSSPFSWKSKKQHTVAKSFAGAEYRALANLTQELQWLKYLLRDIGIDRSSPMSVHCDNRA 112
           G SP SWKSKKQ TVA+S A AEYRA+A+ T EL WLK LL D+G+    PM ++CDN+A
Sbjct: 238 GESPISWKSKKQATVARSTAEAEYRAMASATCELIWLKSLLHDLGVSHPQPMQLYCDNKA 297

Query: 113 ALHIADNPVFHERTKHIEIDCHFVRERSRQMLL 145
           ALHIA NPVFHERTKHIE+DCHFVRE+ +  L+
Sbjct: 298 ALHIAANPVFHERTKHIELDCHFVREKIQARLI 330


Top