BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3920.1
(164 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AGT17078.1 60S ribosomal protein L21 [Saccharum hybrid cultivar ... 312 e-108
ACN27158.1 unknown [Zea mays] AFW89639.1 60S ribosomal protein L... 312 e-107
XP_002464508.1 hypothetical protein SORBIDRAFT_01g019840 [Sorghu... 311 e-107
>AGT17078.1 60S ribosomal protein L21 [Saccharum hybrid cultivar R570]
Length = 164
Score = 312 bits (800), Expect = e-108, Method: Compositional matrix adjust.
Identities = 148/164 (90%), Positives = 157/164 (95%)
Query: 1 MPAGHGLRSRTRDLFSRPFRKKGYIALTTYLRTYKVGDYVDVKVNGAIHKGMPHKFYHGR 60
MPAGHGLRSRTRDLF+RPFRKKGYI LTTYLRTYK+GDYVDVKVNGA+HKGMPHKFYHGR
Sbjct: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
Query: 61 TGKVWNVTKRAIGVEINKQVRGNIIRKRIHVRIEHVQPSRCTEEFKLRKVQNDKLKTEAK 120
TG+VWNVTKRAIGVEINKQV G IIRKRIHVR+EHVQPSRCTEEF+LRK +ND+LK +AK
Sbjct: 61 TGRVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 120
Query: 121 ARGEKISTKRQPAGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
ARGE ISTKRQP GPKPGFMVEGATLETVTPIPYDVVNDLKGGY
Sbjct: 121 ARGEVISTKRQPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
>ACN27158.1 unknown [Zea mays] AFW89639.1 60S ribosomal protein L21 [Zea mays]
Length = 164
Score = 312 bits (799), Expect = e-107, Method: Compositional matrix adjust.
Identities = 148/164 (90%), Positives = 156/164 (95%)
Query: 1 MPAGHGLRSRTRDLFSRPFRKKGYIALTTYLRTYKVGDYVDVKVNGAIHKGMPHKFYHGR 60
MPAGHGLRSRTRDLF+RPFRKKGYI LTTYLRTYK+GDYVDVKVNGA+HKGMPHKFYHGR
Sbjct: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
Query: 61 TGKVWNVTKRAIGVEINKQVRGNIIRKRIHVRIEHVQPSRCTEEFKLRKVQNDKLKTEAK 120
TG VWNVTKRAIGVEINKQV G IIRKRIHVR+EHVQPSRCTEEF+LRK +ND+LK +AK
Sbjct: 61 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 120
Query: 121 ARGEKISTKRQPAGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
ARGE ISTKRQP GPKPGFMVEGATLETVTPIPYDVVNDLKGGY
Sbjct: 121 ARGEVISTKRQPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
>XP_002464508.1 hypothetical protein SORBIDRAFT_01g019840 [Sorghum bicolor]
EER91506.1 hypothetical protein SORBI_001G226500
[Sorghum bicolor]
Length = 164
Score = 311 bits (797), Expect = e-107, Method: Compositional matrix adjust.
Identities = 147/164 (89%), Positives = 157/164 (95%)
Query: 1 MPAGHGLRSRTRDLFSRPFRKKGYIALTTYLRTYKVGDYVDVKVNGAIHKGMPHKFYHGR 60
MPAGHGLRSRTRDLF+RPFRKKGYI LTTYLRTYK+GDYVDVKVNGA+HKGMPHKFYHGR
Sbjct: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
Query: 61 TGKVWNVTKRAIGVEINKQVRGNIIRKRIHVRIEHVQPSRCTEEFKLRKVQNDKLKTEAK 120
TG+VWNVTKRAIGVEINKQV G IIRKRIHVR+EHVQPSRCTEEF+LRK +ND+LK +AK
Sbjct: 61 TGRVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 120
Query: 121 ARGEKISTKRQPAGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
ARGE ISTKRQP GPKPGFMVEGAT+ETVTPIPYDVVNDLKGGY
Sbjct: 121 ARGEVISTKRQPLGPKPGFMVEGATIETVTPIPYDVVNDLKGGY 164