BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3940.1
(156 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010660874.1 PREDICTED: uncharacterized protein LOC104881667 [... 93 1e-19
KYP38698.1 Retrovirus-related Pol polyprotein from transposon TN... 92 2e-19
XP_010229841.1 PREDICTED: uncharacterized protein LOC104582181 [... 91 6e-19
>XP_010660874.1 PREDICTED: uncharacterized protein LOC104881667 [Vitis vinifera]
Length = 386
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 84/137 (61%), Gaps = 9/137 (6%)
Query: 19 SSSTATTVSPAPLNLNFLVQFVSVKLEAENYLVWRKQMLPLLRSQDLFKFVDSTFVPPPS 78
SSS ++ V AP N+ LV S+KL NYL+W Q++P+L+S DL FVD + P PS
Sbjct: 4 SSSASSNVIFAPPNIGHLV---SIKLSDTNYLIWSSQIVPVLKSHDLMGFVDGS-EPCPS 59
Query: 79 HILQHGSDTSIPNPEFQQWDRLDQTLLTFLQATLSASVLSQIPIFNSSRDLYNYLESSFS 138
L D S+ NP + W++ DQ +L+++ ATLS VL+ + S+R++++ L + F+
Sbjct: 60 KSL----DGSL-NPAYILWNKKDQCVLSWINATLSDKVLASVYGITSAREVWSSLANKFA 114
Query: 139 SQITARTHQLTHQLQTI 155
SQ R H L +LQT+
Sbjct: 115 SQSRTRVHHLKRKLQTL 131
>KYP38698.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 330
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 83/134 (61%), Gaps = 6/134 (4%)
Query: 23 ATTVSPAPLNLNFLVQFVSVKLEAENYLVWRKQMLPLLRSQDLFKFVDSTFVPPPSHILQ 82
A +P L LV ++++L +EN+L+WRKQ+ LL++Q+LF VD + V PPS IL
Sbjct: 2 ADDTTPPSLPFATLVHMITIRLNSENFLLWRKQVTSLLQNQNLFHIVDGS-VEPPSPILD 60
Query: 83 HGSDTSIPNPEFQQWDRLDQTLLTFLQATLSASVLSQIPIFNSSRDLYNYLESSFSSQIT 142
SIPNP F QW D+ + + L ++L+ LS+ +++RD++N L ++++S+
Sbjct: 61 -----SIPNPRFAQWQAQDRNVTSLLLSSLTEEALSETLSADTARDIWNALHTAYASRSK 115
Query: 143 ARTHQLTHQLQTIK 156
AR +L +LQ ++
Sbjct: 116 ARELRLRDELQLMR 129
>XP_010229841.1 PREDICTED: uncharacterized protein LOC104582181 [Brachypodium
distachyon]
Length = 332
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
Query: 12 SSTITAPSSSTATTVSPAPLNLNFLVQFVSVKLEAENYLVWRKQMLPLLRSQDLFKFVDS 71
S+ AP+ S + P L +S+KL+A+NYL W Q+LPLLRS L VD
Sbjct: 63 STAAGAPAVSGTLPIDAMPTPLFHFAHLLSIKLKADNYLYWWAQLLPLLRSHYLMGDVDG 122
Query: 72 TFVPPPSHILQHGSDTS-IPNPEFQQWDRLDQTLLTFLQATLSASVLSQIPIFNSSRDLY 130
+ PP + ++ +PNP + W + DQ +L+ +Q++LS V + +S D
Sbjct: 123 SLPCPPQFVSSTVPGSAPLPNPAQRTWVQQDQAILSAIQSSLSEGVAGMVLFAATSHDAR 182
Query: 131 NYLESSFSSQITARTHQLTHQLQTIK 156
+ LESSFSSQ TAR+ Q+ QL +K
Sbjct: 183 SILESSFSSQSTARSMQIRTQLGKLK 208