BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3960.1
(423 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN... 327 e-102
JAT57914.1 Retrovirus-related Pol polyprotein from transposon TN... 291 3e-90
XP_010692517.1 PREDICTED: uncharacterized protein LOC104905624 [... 298 6e-87
>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 327 bits (838), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/423 (43%), Positives = 267/423 (63%), Gaps = 24/423 (5%)
Query: 12 KYEIEKFDGKNDFSYWRMQMKNLLISQKLYKTLTGK--KPRDMSDEDWEELDFEAPATIM 69
K++IEKFDGK FS W++QMK +L L K L GK KP +M+DE W+ELD +A + I
Sbjct: 6 KFDIEKFDGKICFSIWKVQMKAVLTQNGLKKALDGKAKKPVNMTDEQWDELDEKALSAIQ 65
Query: 70 LCLERDVAFLVDGETTVASVWLKLESNFMTKTLTNRVYLKSKLFTCRLVEGSFIQEYVNR 129
LCL ++V V ETT A++WLKLES +MTK+L N++ LK +L+T R+VEG+ IQ ++N
Sbjct: 66 LCLSKEVLREVANETTAAALWLKLESLYMTKSLANKLRLKERLYTIRMVEGTPIQSHLNE 125
Query: 130 FDRIISDLKDIDVKVEHEDQTLILLLSLPKSYENLVQTLLLVG-DRLSMEETRNSLLADD 188
F+ II DL++I++K++ ED+ ++L++SLP +Y++ + +L D LS E+ +++LL+ +
Sbjct: 126 FNSIIMDLENIEIKIDDEDKAVLLIVSLPSTYKHFKEIMLYSNNDTLSFEDVKSNLLSKE 185
Query: 189 LRKVATSSMTSGGVDTDQAQGLFATRGRSNERGKGKGGKSRSKSRG-SFKKTCLSCGELD 247
+ S D+ +GL + RGR+ E+G KSRSKSRG KTC C +
Sbjct: 186 KFDLDIHS-------EDKGEGL-SVRGRTQEKGSTSNKKSRSKSRGRKSNKTCRYCKKFG 237
Query: 248 HFKEACPKRKLKQKNQGYKEKQEMQEAGYVSEEPD-----ECFSDK-----WMLDSGASH 297
H C K KQ+ Q ++ + EA V + D SDK W+LDSG +
Sbjct: 238 HDISDCFILKKKQERQ--EKGKNPAEAANVETDSDGDVMISVSSDKRSKTEWILDSGCTF 295
Query: 298 HMCPNRKWFTTYRSIDGGTVIMVNDNICKTVGLGTIRIQMHDGVVRTLTDVRHIPDLRKN 357
HMCP + FTT +D G V+M ND CK G+GTI+I+ HDG ++TL++VR IPDL++N
Sbjct: 296 HMCPYKDLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRN 355
Query: 358 LISLGVLERNGCKIVIENGSIKVVRGSLVVMRGTRYGNLYKLLGTTITGDVAVGISGRDP 417
LISLG LE GCK E G +KV +G++V+++ R G+LY L G+ +TG AV S D
Sbjct: 356 LISLGTLESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDK 415
Query: 418 TAS 420
A+
Sbjct: 416 DAT 418
>JAT57914.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 529
Score = 291 bits (746), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 181/426 (42%), Positives = 265/426 (62%), Gaps = 24/426 (5%)
Query: 12 KYEIEKFDGKNDFSYWRMQMKNLLISQKLYKTLTG--KKPRDMSDEDWEELDFEAPATIM 69
K+EIEKFD F W+++M+ +L Q L K L G K +S E+ +++D A A I
Sbjct: 4 KFEIEKFDRNISFGIWQVKMRAILTQQGLQKALLGIEKMSSTLSQEEKQDMDERALAVIQ 63
Query: 70 LCLERDVAFLVDGETTVASVWLKLESNFMTKTLTNRVYLKSKLFTCRLVEGSFIQEYVNR 129
LCL +V V E + A++WLKLES +MTK+LT++++LK +LF ++VEG+ ++ +++
Sbjct: 64 LCLSNEVLREVIHEKSAAALWLKLESLYMTKSLTSKLHLKQRLFMLKMVEGTSVKTHLDE 123
Query: 130 FDRIISDLKDIDVKVEHEDQTLILLLSLPKSYENLVQTLLLVGDRLSMEETRNSLLADDL 189
F+ I+ DL++++VK+E EDQ L+LL SLP S+++ +TLL D +S+E+ ++SL + +L
Sbjct: 124 FNSILMDLENLEVKIEDEDQALLLLCSLPPSFKHFRETLLYGRDSISVEDVKSSLFSKEL 183
Query: 190 RKVATSSMTSGGVDTDQAQGLFATRGRSNERG-KGKGGKSRSKSRGSFKKTCLSCGELDH 248
+ +S GV ++GL A RGRS ER + K G+ RSKSR FK C C H
Sbjct: 184 MDRDLTGCSSEGV----SEGLVA-RGRSQERSFEKKKGERRSKSRNKFK-ICNYCKMKGH 237
Query: 249 FKEACPKRKLKQKNQGYKEKQEMQEAGYVSEEPDEC-----------FSDKWMLDSGASH 297
K C K KQK + ++A V DEC +D+W+LDSG S+
Sbjct: 238 IKSECYGLKNKQKKEEKNP----EKAAEVGVAKDECEDYVLSVNAVRSNDEWILDSGYSY 293
Query: 298 HMCPNRKWFTTYRSIDGGTVIMVNDNICKTVGLGTIRIQMHDGVVRTLTDVRHIPDLRKN 357
HMCP + F TY DGG V+M N+ KT+G+G+IRI+M+DG+VRTLT VRH+ DL+KN
Sbjct: 294 HMCPYKDRFHTYEHDDGGVVLMGNNAPRKTIGIGSIRIKMYDGIVRTLTQVRHVLDLKKN 353
Query: 358 LISLGVLERNGCKIVIENGSIKVVRGSLVVMRGTRYGNLYKLLGTTITGDVAVGISGRDP 417
LISLG LE NGCK E G ++V RG+L++M+ R +LY L+GTT+TG A
Sbjct: 354 LISLGTLEANGCKYSAEGGVLRVSRGALILMKVKRTNSLYTLIGTTVTGAAAAVSPSMSE 413
Query: 418 TASTRL 423
+ T+L
Sbjct: 414 SEVTKL 419
>XP_010692517.1 PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris
subsp. vulgaris]
Length = 2676
Score = 298 bits (764), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 175/428 (40%), Positives = 261/428 (60%), Gaps = 27/428 (6%)
Query: 12 KYEIEKFDGKNDFSYWRMQMKNLLISQKLYKTLTGK--KPRDMSDEDWEELDFEAPATIM 69
K +IEKFD +F W+++MK LLI ++K L GK KP M++E WEELD +A I
Sbjct: 2 KLDIEKFDRSINFGLWQVKMKALLIQNGVHKALEGKVKKPTTMTEEKWEELDLKALLAIQ 61
Query: 70 LCLERDVAFLVDGETTVASVWLKLESNFMTKTLTNRVYLKSKLFTCRLVEGSFIQEYVNR 129
LCL +V V E + A +WLKLES +M K++TNR+ LKS+L++ RL EG+ ++ +++
Sbjct: 62 LCLSNEVLREVAKEDSSAGLWLKLESLYMAKSVTNRLLLKSRLYSLRLEEGNSLKSHIDE 121
Query: 130 FDRIISDLKDIDVKVEHEDQTLILLLSLPKSYENLVQTLLLVGDRLSMEETRNSLLADDL 189
F I+ DL++IDV ++ ED + LL SLP SY++ +T+L D LS+++ R++L +
Sbjct: 122 FYSIVMDLQNIDVILDDEDLAIWLLCSLPHSYKHFRETILYGRDDLSIDDVRDAL---NQ 178
Query: 190 RKVATSSMTSGGVDTDQAQGLFATRGRSNERGK--------GKGGKSRSKSRGSFK-KTC 240
R++ + +TS ++ + GLF RGRSN+ G+S+SK S K KTC
Sbjct: 179 RELIDNQLTSK--SSNSSDGLF-VRGRSNDVASTYQGGNGGKNRGRSKSKKPNSNKHKTC 235
Query: 241 LSCGELDHFKEACPKRKLKQ----KNQGYKEKQEMQEAGYVSEEPDECFSD----KWMLD 292
C H K C K K KQ K + KE + YV + + D +W++D
Sbjct: 236 NYCHLKGHIKSECYKLKNKQSGDSKPRKGKEPMNSADVSYVDFDSESGALDVSKSEWIMD 295
Query: 293 SGASHHMCPNRKWFTTYRSIDGGTVIMVNDNICKTVGLGTIRIQMHDGVVRTLTDVRHIP 352
SG S H+ P + FT+Y +GGTV M N+ CK VG+G++ I M DG VRTL+ VRH+P
Sbjct: 296 SGCSFHVTPYKDMFTSYEEFNGGTVTMGNNATCKVVGIGSVDITMFDGTVRTLSKVRHVP 355
Query: 353 DLRKNLISLGVLERNGCKIVIENGSIKVVRGSLVVMRGTRYGNLYKLLGTTITG--DVAV 410
+++KNLISLG L+ NGCK + E G + V+RG+LV+M+G + G+LY L G+ ++G +V+
Sbjct: 356 EMKKNLISLGTLDNNGCKYIAEGGVLNVIRGALVLMKGIKRGSLYVLQGSMVSGSANVST 415
Query: 411 GISGRDPT 418
G D T
Sbjct: 416 GTMSDDDT 423