BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4130.1
(557 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017228135.1 PREDICTED: uncharacterized protein LOC108203646, ... 362 e-114
XP_017217273.1 PREDICTED: uncharacterized protein LOC108194846 [... 347 e-109
XP_017255857.1 PREDICTED: transposon Ty3-I Gag-Pol polyprotein i... 365 e-109
>XP_017228135.1 PREDICTED: uncharacterized protein LOC108203646, partial [Daucus
carota subsp. sativus]
Length = 690
Score = 362 bits (930), Expect = e-114, Method: Compositional matrix adjust.
Identities = 191/452 (42%), Positives = 270/452 (59%), Gaps = 41/452 (9%)
Query: 113 RNQDPHVRVEIPDFTGEEQIEEVLDWLNEVERIFEYLELPENKKVKLVSVKLKGYASSWW 172
R D H ++EIP+F+G Q EE +DWLN VERIFE+ E+PEN KVKLV++KLKG AS+WW
Sbjct: 75 RRWDGHFKIEIPEFSGSIQAEEFVDWLNTVERIFEFKEVPENMKVKLVAIKLKGRASAWW 134
Query: 173 QQLQMTRMQTGKERVQTWSKMQRLIRSQFLPLNYEGMLFQQYQSIQQGNSSVREYTNDFY 232
+QL++ R + GK ++ W KM++ ++ FLP NY +FQ+ Q+++QG+ SV +YT +FY
Sbjct: 135 EQLKLKRERRGKSKIVDWEKMKKKLKENFLPHNYVQAMFQRLQNLRQGSRSVDDYTEEFY 194
Query: 233 KTKTRVNLVESETQVIHRYLMGLRPNIRNWVELQPCWTLASAVQLAMKVESQQTRPN--N 290
+ +R +L ESE Q++ YL GLR N++ ++L W+++ Q A+ VE +Q +P N
Sbjct: 195 QLISRNDLSESEEQLVACYLGGLRLNVQEALDLHKFWSVSEVYQAALAVEKRQNKPRFWN 254
Query: 291 QQNQMDRGQVQIGAYKGQGGSTQNIETGPSFTQRSGPTPYSKGRGQNQGSGTPDFNPGGH 350
Q+Q D Q + Q +QN T P TP +K +G
Sbjct: 255 SQSQ-DMTANQRFSIDNQAKGSQNT-TMPRKNMSESTTPQNKSKGTG------------- 299
Query: 351 DITSKYVGEKLKCYKCGKEGHKSAQCRKKNANLLVSEEVEGFGAAHDDGGSINEENLLEF 410
LKC+KC + GH SA CR++ L+ G H EE + +
Sbjct: 300 ----------LKCFKCNEPGHTSAACRRERGKQLMIG-----GEEHSQRAEYEEEPIYDT 344
Query: 411 T-EDEVLYDDKDLPALVVRRAMLAPKAIEARPQ----RTNIFRTRCSSHGRLCNVIIDGG 465
E++VLY D +LV+R+A+L PK P+ R NIF T C+ G++C +IID G
Sbjct: 345 EPEEDVLYGDVG-ESLVIRKALLLPK---EEPKEDWLRNNIFHTTCTIEGKVCKLIIDSG 400
Query: 466 SCENFVSKEMVSKLNLAMQPHPNPYEVVWFKKGGEVKVTHQCRVPFSIGKSYSDEVLCDV 525
SCEN +S+E V KL L + HP PY++ WFKKG EV V +C V FSIG+ Y D V CDV
Sbjct: 401 SCENVISREAVDKLKLKQEKHPKPYKLSWFKKGNEVSVDTRCLVSFSIGRKYFDNVWCDV 460
Query: 526 IGMEACHLLLGRPWQYDNKTVHLGEKNIYTFY 557
+ M+ACH+LLGRPWQYD +H G+KN YTF+
Sbjct: 461 VKMDACHILLGRPWQYDRNAIHEGKKNTYTFW 492
>XP_017217273.1 PREDICTED: uncharacterized protein LOC108194846 [Daucus carota
subsp. sativus]
Length = 558
Score = 347 bits (889), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/441 (42%), Positives = 267/441 (60%), Gaps = 33/441 (7%)
Query: 118 HVRVEIPDFTGEEQIEEVLDWLNEVERIFEYLELPENKKVKLVSVKLKGYASSWWQQLQM 177
+V++ IPDF G +E +DWLN VER+FEY ++ + +KVKLV+VKLK YAS WW+ L+
Sbjct: 86 NVKITIPDFEGRNHPDEFIDWLNTVERVFEYNDVHDRQKVKLVAVKLKKYASLWWEHLKK 145
Query: 178 TRMQTGKERVQTWSKMQRLIRSQFLPLNYEGMLFQQYQSIQQGNSSVREYTNDFYKTKTR 237
R++ GK ++ TW KM++ +R +FLP NY+ F ++ + +QGN SV +Y +F R
Sbjct: 146 QRVRDGKAKICTWEKMKKELRKKFLPDNYKQDAFLKFHNFKQGNLSVEDYMTEFENLMMR 205
Query: 238 VNLVESETQVIHRYLMGLRPNIRNWVELQPCWTLASAVQLAMKVESQQTRPNNQQNQMDR 297
+VE E Q I R+L GL+ I + V LQP WT +LA+KVE QQ +P + N+
Sbjct: 206 CEVVEPEEQTIARFLGGLKEEISDVVNLQPFWTYQDVCKLALKVEKQQ-KPKGRNNR--- 261
Query: 298 GQVQIGAYKGQGGSTQNIETGPSFTQRSGPTPYSKGRGQNQGSGTPDFNPGGHDITSKYV 357
+ Q T T S ++S PT +G + S + + TS+
Sbjct: 262 -------FSNQASGT----THSSVVRKSPPT----DKGSDLKSSKKNDSTAN---TSRGS 303
Query: 358 GEK--LKCYKCGKEGHKSAQCRKKNANLLVSEEVEGFGAAHDDGGSINEENLLEFTEDEV 415
G K +KC+KC GH +++C + + EE+E +G +E E+
Sbjct: 304 GTKASIKCFKCQGYGHIASECPNRKVITIFEEEIEEQTPWEAEGSGQEDE--------EI 355
Query: 416 LYDDKDLPALVVRRAMLAPKAIEARPQRTNIFRTRCSSHGRLCNVIIDGGSCENFVSKEM 475
Y+D+ +LV+RR++ + +A E R+NIF T+C+S G++CNVIIDGGSCEN VS ++
Sbjct: 356 TYEDQG-ESLVIRRSLNSMQAQEDSWLRSNIFHTKCTSQGKVCNVIIDGGSCENVVSNDI 414
Query: 476 VSKLNLAMQPHPNPYEVVWFKKGGEVKVTHQCRVPFSIGKSYSDEVLCDVIGMEACHLLL 535
V KLNL + HP PY++ WF+KG EVKV QC V FSIG Y DEVLCDV+ M+ACHLLL
Sbjct: 415 VQKLNLKTEKHPRPYKLSWFRKGNEVKVDKQCLVQFSIGSKYKDEVLCDVVPMDACHLLL 474
Query: 536 GRPWQYDNKTVHLGEKNIYTF 556
GRPWQYD +T H G KN YTF
Sbjct: 475 GRPWQYDRRTHHDGYKNTYTF 495
>XP_017255857.1 PREDICTED: transposon Ty3-I Gag-Pol polyprotein isoform X1 [Daucus
carota subsp. sativus]
Length = 1415
Score = 365 bits (936), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/452 (42%), Positives = 272/452 (60%), Gaps = 41/452 (9%)
Query: 113 RNQDPHVRVEIPDFTGEEQIEEVLDWLNEVERIFEYLELPENKKVKLVSVKLKGYASSWW 172
R D H ++EIP+F+G Q EE +DWLN VERIFE+ E+PEN KVKLV++KLKG AS+WW
Sbjct: 75 RRWDGHFKIEIPEFSGSIQAEEFVDWLNTVERIFEFKEVPENMKVKLVAIKLKGRASAWW 134
Query: 173 QQLQMTRMQTGKERVQTWSKMQRLIRSQFLPLNYEGMLFQQYQSIQQGNSSVREYTNDFY 232
+QL++ R + GK ++ W KM++ ++ FLP NY +FQ+ Q+++QG+ SV +YT +FY
Sbjct: 135 EQLKLKRERRGKSKIVDWEKMKKKLKENFLPHNYVQAMFQRLQNLRQGSRSVDDYTEEFY 194
Query: 233 KTKTRVNLVESETQVIHRYLMGLRPNIRNWVELQPCWTLASAVQLAMKVESQQTRPN--N 290
+ +R +L ESE Q++ RYL GLR N++ ++L W+++ Q A+ VE +Q +P N
Sbjct: 195 QLISRNDLSESEEQLVARYLGGLRLNVQEALDLHKFWSVSEVYQAALAVEKRQNKPRFWN 254
Query: 291 QQNQMDRGQVQIGAYKGQGGSTQNIETGPSFTQRSGPTPYSKGRGQNQGSGTPDFNPGGH 350
Q+Q D Q + Q +QN T P TP QN+ GT
Sbjct: 255 SQSQ-DMTANQRFSIDNQAKGSQNT-TMPRKNMSESTTP------QNKSKGT-------- 298
Query: 351 DITSKYVGEKLKCYKCGKEGHKSAQCRKKNANLLVSEEVEGFGAAHDDGGSINEENLLEF 410
LKC+KC + GH SA CR++ L+ G H EE + +
Sbjct: 299 ---------GLKCFKCNEPGHTSAACRRERGKQLMIG-----GEEHSQRAEYEEEPIYDT 344
Query: 411 -TEDEVLYDDKDLPALVVRRAMLAPKAIEARPQ----RTNIFRTRCSSHGRLCNVIIDGG 465
E++VLY D +LV+R+A+L PK P+ R NIF T C+ G++C +IID G
Sbjct: 345 EPEEDVLYGDVG-ESLVIRKALLLPK---EEPKEDWLRNNIFHTTCTIEGKVCKLIIDSG 400
Query: 466 SCENFVSKEMVSKLNLAMQPHPNPYEVVWFKKGGEVKVTHQCRVPFSIGKSYSDEVLCDV 525
SCEN +S+E V KL L + HP PY++ WFKKG EV V +C V FSIG+ Y D V CDV
Sbjct: 401 SCENVISREAVDKLKLKQEKHPKPYKLSWFKKGNEVSVDTRCLVSFSIGRKYFDNVWCDV 460
Query: 526 IGMEACHLLLGRPWQYDNKTVHLGEKNIYTFY 557
+ M+ACH+LLGRPWQYD +H G+KN YTF+
Sbjct: 461 VKMDACHILLGRPWQYDRNAIHEGKKNTYTFW 492