BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4460.1
(195 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN75374.1 hypothetical protein VITISV_029152 [Vitis vinifera] 76 6e-13
GAU44778.1 hypothetical protein TSUD_27470 [Trifolium subterraneum] 76 7e-13
AAP12989.1 putative reverse transcriptase [Oryza sativa Japonica... 73 1e-11
>CAN75374.1 hypothetical protein VITISV_029152 [Vitis vinifera]
Length = 655
Score = 76.3 bits (186), Expect = 6e-13, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 69/158 (43%), Gaps = 29/158 (18%)
Query: 43 RLEKAERSFWWGHAENEQKFHFINCDIIGSPKHKGGLGIRTLQHLNEALIAKMTWRILTN 102
RLEK +R F WG E++ HF+N D++ S K KGGLGIR LN AL+ K +WR
Sbjct: 348 RLEKIQRDFLWGGGALEKRPHFVNWDVVRSHKMKGGLGIRNFSILNRALLCKWSWRFAAE 407
Query: 103 SD----LIIPET--------------QQWNIELITNHFDSITVQAITGIYVPRFSHRDKL 144
D L+I W +E + + + + + D++
Sbjct: 408 RDSFWKLVISSKYGEXEGGWISCEVFNDWELEAVASLLSVLQGKRLN------VGMEDRV 461
Query: 145 EWCPMESGKFTTKSYYTEIKALPALSNEAYNFPWRKFW 182
W ++G F+ KS Y + S A FPWR W
Sbjct: 462 VWNASKNGSFSVKSLYNTLD-----SGGAVPFPWRIIW 494
>GAU44778.1 hypothetical protein TSUD_27470 [Trifolium subterraneum]
Length = 737
Score = 76.3 bits (186), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 38 KGVVDRLEKAERSFWWGHAENEQKFHFINCDIIGSPKHKGGLGIRTLQHLNEALIAKMTW 97
K + D +EK +R F WG + +K H I+ ++ PK GGLG+R+ +NEA + KM W
Sbjct: 8 KTLCDEMEKIQRGFLWGDTDQTRKPHLISWEVCCLPKDDGGLGMRSPHQMNEAFLMKMLW 67
Query: 98 RILTNSDLIIPET--QQWNIELITNHFDSITVQAITGIYVPRFSHRDKL 144
++ N + + + + W+I +T H TV + I P+ + KL
Sbjct: 68 NMINNPNDLWCKVLYRDWDINFLTTHLPQTTVNQVLAIPAPKVHTKSKL 116
>AAP12989.1 putative reverse transcriptase [Oryza sativa Japonica Group]
ABF96539.1 retrotransposon protein, putative,
unclassified [Oryza sativa Japonica Group] EAY90410.1
hypothetical protein OsI_11988 [Oryza sativa Indica
Group] EAZ27280.1 hypothetical protein OsJ_11216 [Oryza
sativa Japonica Group]
Length = 818
Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 42/158 (26%)
Query: 42 DRLEKAERSFWWGHAENEQKFHFINCDIIGSPKHKGGLGIRTLQHLNEALIAKMTWRILT 101
D + R+FWWGH+ +E+K H+I+ D + SPK GGLG R + N+AL+A+ WR+LT
Sbjct: 301 DDYAQMVRNFWWGHSSDERKVHWISWDKLTSPKSHGGLGFRDMNCFNQALLARQAWRLLT 360
Query: 102 NS------------------------------------DLIIPETQQWN---IELITNHF 122
+L+IP T++WN I L+T
Sbjct: 361 VPESLCARVLKAKYYPNGHGNRLEPLKKKTWNRLTYVCELMIPGTKEWNEPLIRLVTKED 420
Query: 123 DSITVQAITGIYVPRFSHRDKLEWCPMESGKFTTKSYY 160
D++ I +P D W ++G F+ +S Y
Sbjct: 421 DAL---EILKTRIPANETTDYPTWHFEKTGLFSVRSAY 455