BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4490.1
(112 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_011458881.1 PREDICTED: pre-mRNA-processing protein 40A [Fraga... 141 9e-37
KVH98803.1 FF domain-containing protein [Cynara cardunculus var.... 137 2e-35
XP_010273523.1 PREDICTED: pre-mRNA-processing protein 40A [Nelum... 136 3e-35
>XP_011458881.1 PREDICTED: pre-mRNA-processing protein 40A [Fragaria vesca subsp.
vesca]
Length = 994
Score = 141 bits (355), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 66/83 (79%), Positives = 74/83 (89%)
Query: 17 QKARKGTAVAGMINGTSSEEKAVDDETLTYATKQEAKVAFKTLLESANVESDWTWEQAMR 76
++A+KG AVAG +N T SEEKA+DDE L YA+KQEAK AFK+LLESANV SDWTWEQAMR
Sbjct: 402 EEAKKGMAVAGKVNVTPSEEKAIDDEPLVYASKQEAKNAFKSLLESANVHSDWTWEQAMR 461
Query: 77 VIINDKRYGALRSLGERKQAFNE 99
IINDKRYGALR+LGERKQAFNE
Sbjct: 462 EIINDKRYGALRTLGERKQAFNE 484
>KVH98803.1 FF domain-containing protein [Cynara cardunculus var. scolymus]
Length = 1071
Score = 137 bits (345), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 63/83 (75%), Positives = 73/83 (87%)
Query: 17 QKARKGTAVAGMINGTSSEEKAVDDETLTYATKQEAKVAFKTLLESANVESDWTWEQAMR 76
++A+KG AVAG +N T EEKAVDDE YA+KQEAK+AFK+LLE ANVE+DW WEQAMR
Sbjct: 381 EEAKKGMAVAGKVNTTQLEEKAVDDEPFIYASKQEAKIAFKSLLEDANVEADWNWEQAMR 440
Query: 77 VIINDKRYGALRSLGERKQAFNE 99
VIINDKRYGAL++LGERKQAFNE
Sbjct: 441 VIINDKRYGALKTLGERKQAFNE 463
>XP_010273523.1 PREDICTED: pre-mRNA-processing protein 40A [Nelumbo nucifera]
XP_010273530.1 PREDICTED: pre-mRNA-processing protein
40A [Nelumbo nucifera]
Length = 1046
Score = 136 bits (343), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 65/83 (78%), Positives = 71/83 (85%)
Query: 17 QKARKGTAVAGMINGTSSEEKAVDDETLTYATKQEAKVAFKTLLESANVESDWTWEQAMR 76
++A+KG AVAG IN T EEK +DDE L YA K EAK AFK LLESANVESDWTWEQAMR
Sbjct: 444 EEAKKGMAVAGKINITPVEEKTIDDEPLVYANKLEAKNAFKALLESANVESDWTWEQAMR 503
Query: 77 VIINDKRYGALRSLGERKQAFNE 99
VIINDKRYGAL++LGERKQAFNE
Sbjct: 504 VIINDKRYGALKTLGERKQAFNE 526