BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4600.1
(81 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU45108.1 hypothetical protein TSUD_183160 [Trifolium subterran... 52 3e-07
>GAU45108.1 hypothetical protein TSUD_183160 [Trifolium subterraneum]
Length = 90
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 60/73 (82%), Gaps = 5/73 (6%)
Query: 9 KDAYPPPGYPPQGYPPQQGYPPQQGYPPQQGYGYPPPQQGYPPQQQKPQKQGPGAMEGCL 68
KDAYPPPGYP QGYP QQGYP QQGYPPQQGYGYPPPQ QQ P++Q G +EGCL
Sbjct: 23 KDAYPPPGYPAQGYP-QQGYP-QQGYPPQQGYGYPPPQY---TQQPPPRRQEGGFLEGCL 77
Query: 69 AALCCCCLLDACF 81
AALCCCC+LDACF
Sbjct: 78 AALCCCCMLDACF 90