BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000058.1_g4610.1
         (78 letters)

Database: ./nr 
           95,329,361 sequences; 35,143,497,570 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OAY71834.1 NADH dehydrogenase (ubiquinone) iron-sulfur protein 4...   145   4e-43
OAY67240.1 NADH dehydrogenase (ubiquinone) iron-sulfur protein 4...   142   4e-42
XP_010938997.1 PREDICTED: NADH dehydrogenase [ubiquinone] iron-s...   141   2e-41

>OAY71834.1 NADH dehydrogenase (ubiquinone) iron-sulfur protein 4,
           mitochondrial [Ananas comosus]
          Length = 154

 Score =  145 bits (366), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 65/74 (87%), Positives = 71/74 (95%)

Query: 5   CRWENPLMGWTSTGDPYANVGEAGLTFDSEEAAKFFAEKHGWDYVVKKRHTPLLKVKAYA 64
            +WENPLMGWTSTGDPYANVG+AGL+FDSEEAAK FAEKHGWD+VV+KRHTPLLKVKAYA
Sbjct: 81  LKWENPLMGWTSTGDPYANVGDAGLSFDSEEAAKSFAEKHGWDFVVRKRHTPLLKVKAYA 140

Query: 65  DNFKWKGPPKTKED 78
           DNFKWKGPPK +ED
Sbjct: 141 DNFKWKGPPKIEED 154


>OAY67240.1 NADH dehydrogenase (ubiquinone) iron-sulfur protein 4,
           mitochondrial [Ananas comosus]
          Length = 153

 Score =  142 bits (358), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 66/73 (90%), Positives = 69/73 (94%)

Query: 6   RWENPLMGWTSTGDPYANVGEAGLTFDSEEAAKFFAEKHGWDYVVKKRHTPLLKVKAYAD 65
           +WENPLMGWTSTGDPYANVGEA L+FDSEEAAK FAEKHGWDYVV+KRHTPLLK KAYAD
Sbjct: 81  KWENPLMGWTSTGDPYANVGEAALSFDSEEAAKAFAEKHGWDYVVRKRHTPLLKPKAYAD 140

Query: 66  NFKWKGPPKTKED 78
           NFKWKGPPKT ED
Sbjct: 141 NFKWKGPPKTDED 153


>XP_010938997.1 PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4,
           mitochondrial [Elaeis guineensis]
          Length = 158

 Score =  141 bits (355), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 62/73 (84%), Positives = 70/73 (95%)

Query: 6   RWENPLMGWTSTGDPYANVGEAGLTFDSEEAAKFFAEKHGWDYVVKKRHTPLLKVKAYAD 65
           +WENPLMGWTSTGDPYANVG+A L+FDSEEAAK FAEKHGWDYVV+KRHTPLLK+K+YAD
Sbjct: 86  KWENPLMGWTSTGDPYANVGDAALSFDSEEAAKAFAEKHGWDYVVRKRHTPLLKLKSYAD 145

Query: 66  NFKWKGPPKTKED 78
           NFKWKGPPK+ E+
Sbjct: 146 NFKWKGPPKSDEE 158


Top