BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000058.1_g4640.1
         (118 letters)

Database: ./nr 
           95,329,361 sequences; 35,143,497,570 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ACR37738.1 unknown [Zea mays] AFW89327.1 hypothetical protein ZE...   151   2e-44
DAA43947.1 TPA: hypothetical protein ZEAMMB73_528269, partial [Z...   150   7e-44
NP_001152574.1 40S ribosomal protein S3a [Zea mays] ACG48293.1 4...   151   2e-43

>ACR37738.1 unknown [Zea mays] AFW89327.1 hypothetical protein
          ZEAMMB73_166147 [Zea mays]
          Length = 175

 Score =  151 bits (381), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 80/86 (93%), Positives = 85/86 (98%)

Query: 1  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSLFSVRNVGKTLVSRTQGTKIASEG 60
          MAVGKNKRISKGKKGGKKKTVDPF+KKDWYDIKAPS+FSVRN+GKTLVSRTQGT+IASEG
Sbjct: 1  MAVGKNKRISKGKKGGKKKTVDPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTRIASEG 60

Query: 61 LKHRVFEVCLADLQNDEDQSYRKIRL 86
          LKHRVFEVCLADLQ DEDQ+YRKIRL
Sbjct: 61 LKHRVFEVCLADLQGDEDQAYRKIRL 86


>DAA43947.1 TPA: hypothetical protein ZEAMMB73_528269, partial [Zea mays]
          Length = 188

 Score =  150 bits (378), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 79/86 (91%), Positives = 85/86 (98%)

Query: 1  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSLFSVRNVGKTLVSRTQGTKIASEG 60
          MAVGKNKRISKGKKGGKKKTVDPF+KKDWYDIKAPS+FSVRN+GKTLVSRTQGT+IAS+G
Sbjct: 1  MAVGKNKRISKGKKGGKKKTVDPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTRIASDG 60

Query: 61 LKHRVFEVCLADLQNDEDQSYRKIRL 86
          LKHRVFEVCLADLQ DEDQ+YRKIRL
Sbjct: 61 LKHRVFEVCLADLQGDEDQAYRKIRL 86


>NP_001152574.1 40S ribosomal protein S3a [Zea mays] ACG48293.1 40S ribosomal
          protein S3a [Zea mays] AFW89328.1 40S ribosomal protein
          S3a [Zea mays]
          Length = 260

 Score =  151 bits (381), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 80/86 (93%), Positives = 85/86 (98%)

Query: 1  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSLFSVRNVGKTLVSRTQGTKIASEG 60
          MAVGKNKRISKGKKGGKKKTVDPF+KKDWYDIKAPS+FSVRN+GKTLVSRTQGT+IASEG
Sbjct: 1  MAVGKNKRISKGKKGGKKKTVDPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTRIASEG 60

Query: 61 LKHRVFEVCLADLQNDEDQSYRKIRL 86
          LKHRVFEVCLADLQ DEDQ+YRKIRL
Sbjct: 61 LKHRVFEVCLADLQGDEDQAYRKIRL 86


Top