BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g4640.1
(118 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ACR37738.1 unknown [Zea mays] AFW89327.1 hypothetical protein ZE... 151 2e-44
DAA43947.1 TPA: hypothetical protein ZEAMMB73_528269, partial [Z... 150 7e-44
NP_001152574.1 40S ribosomal protein S3a [Zea mays] ACG48293.1 4... 151 2e-43
>ACR37738.1 unknown [Zea mays] AFW89327.1 hypothetical protein
ZEAMMB73_166147 [Zea mays]
Length = 175
Score = 151 bits (381), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 80/86 (93%), Positives = 85/86 (98%)
Query: 1 MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSLFSVRNVGKTLVSRTQGTKIASEG 60
MAVGKNKRISKGKKGGKKKTVDPF+KKDWYDIKAPS+FSVRN+GKTLVSRTQGT+IASEG
Sbjct: 1 MAVGKNKRISKGKKGGKKKTVDPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTRIASEG 60
Query: 61 LKHRVFEVCLADLQNDEDQSYRKIRL 86
LKHRVFEVCLADLQ DEDQ+YRKIRL
Sbjct: 61 LKHRVFEVCLADLQGDEDQAYRKIRL 86
>DAA43947.1 TPA: hypothetical protein ZEAMMB73_528269, partial [Zea mays]
Length = 188
Score = 150 bits (378), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 79/86 (91%), Positives = 85/86 (98%)
Query: 1 MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSLFSVRNVGKTLVSRTQGTKIASEG 60
MAVGKNKRISKGKKGGKKKTVDPF+KKDWYDIKAPS+FSVRN+GKTLVSRTQGT+IAS+G
Sbjct: 1 MAVGKNKRISKGKKGGKKKTVDPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTRIASDG 60
Query: 61 LKHRVFEVCLADLQNDEDQSYRKIRL 86
LKHRVFEVCLADLQ DEDQ+YRKIRL
Sbjct: 61 LKHRVFEVCLADLQGDEDQAYRKIRL 86
>NP_001152574.1 40S ribosomal protein S3a [Zea mays] ACG48293.1 40S ribosomal
protein S3a [Zea mays] AFW89328.1 40S ribosomal protein
S3a [Zea mays]
Length = 260
Score = 151 bits (381), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 80/86 (93%), Positives = 85/86 (98%)
Query: 1 MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSLFSVRNVGKTLVSRTQGTKIASEG 60
MAVGKNKRISKGKKGGKKKTVDPF+KKDWYDIKAPS+FSVRN+GKTLVSRTQGT+IASEG
Sbjct: 1 MAVGKNKRISKGKKGGKKKTVDPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTRIASEG 60
Query: 61 LKHRVFEVCLADLQNDEDQSYRKIRL 86
LKHRVFEVCLADLQ DEDQ+YRKIRL
Sbjct: 61 LKHRVFEVCLADLQGDEDQAYRKIRL 86