BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000065.1_g0010.1
(186 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ERM98543.1 hypothetical protein AMTR_s04311p00004950, partial [A... 278 9e-92
KYP58720.1 Retrovirus-related Pol polyprotein from transposon TN... 276 4e-89
XP_013684573.1 PREDICTED: uncharacterized protein LOC106388948, ... 273 2e-88
>ERM98543.1 hypothetical protein AMTR_s04311p00004950, partial [Amborella
trichopoda]
Length = 288
Score = 278 bits (710), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 128/182 (70%), Positives = 156/182 (85%), Gaps = 2/182 (1%)
Query: 1 MDNAYPLSTPIVVRSLDTGKDPYRPKEDNEELLGPEVPYLSAIGALLYLAQCTRPDISFA 60
MD ++PLS+P+VVRSLD KDP+RP+E++EELLGPEVPYLSAIGAL+YLA CTRPDI+F+
Sbjct: 13 MDKSHPLSSPMVVRSLDVEKDPFRPREEHEELLGPEVPYLSAIGALMYLANCTRPDIAFS 72
Query: 61 VNLLARFSSALTKRHWMGVKQILRYLRGTTDMGLFYPKSPSNGSQVIGYTDAGYLFDPHK 120
VNLLARFSSA T RHW G+K ILRYL+GT D GLFY S + GSQ+IGY DAGYL DPHK
Sbjct: 73 VNLLARFSSAPTYRHWKGIKHILRYLQGTIDKGLFY--SNNCGSQLIGYADAGYLSDPHK 130
Query: 121 GVSQTGYVFTSGGTAFSWRSSKQSMPATSSNHSEIIALHEATRECVWLRSIISHIKISCD 180
SQTGY+FT G TA SWRS+KQ++ ATSSNH+EI+A+HEA+RECVWLRS+ HI+ +C
Sbjct: 131 ARSQTGYLFTCGDTAISWRSTKQTLVATSSNHAEILAIHEASRECVWLRSMTQHIRGTCG 190
Query: 181 IS 182
++
Sbjct: 191 LT 192
>KYP58720.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 428
Score = 276 bits (705), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 129/182 (70%), Positives = 154/182 (84%), Gaps = 2/182 (1%)
Query: 1 MDNAYPLSTPIVVRSLDTGKDPYRPKEDNEELLGPEVPYLSAIGALLYLAQCTRPDISFA 60
MD ++PL TP+VVRSLD KDP+RP+E +EE+LGPEVPYLSAIGAL+YLA TRPDI+FA
Sbjct: 155 MDKSHPLCTPMVVRSLDVNKDPFRPQEKDEEILGPEVPYLSAIGALMYLANYTRPDIAFA 214
Query: 61 VNLLARFSSALTKRHWMGVKQILRYLRGTTDMGLFYPKSPSNGSQVIGYTDAGYLFDPHK 120
VNLLAR+SS+ T+RHW GVKQILRYLRGT DMGL Y S + ++ GY DAGYL DPH
Sbjct: 215 VNLLARYSSSPTRRHWNGVKQILRYLRGTMDMGLLY--SNVSKPELNGYADAGYLSDPHN 272
Query: 121 GVSQTGYVFTSGGTAFSWRSSKQSMPATSSNHSEIIALHEATRECVWLRSIISHIKISCD 180
G SQTGY+FTSGGTA SWRS KQ++ ATSSNH+EI+ALHEA+RECVWLRS+I HI+ +C
Sbjct: 273 GKSQTGYLFTSGGTAISWRSVKQTISATSSNHAEILALHEASRECVWLRSVIQHIRETCG 332
Query: 181 IS 182
+S
Sbjct: 333 LS 334
>XP_013684573.1 PREDICTED: uncharacterized protein LOC106388948, partial [Brassica
napus]
Length = 390
Score = 273 bits (698), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 132/181 (72%), Positives = 151/181 (83%), Gaps = 2/181 (1%)
Query: 6 PLSTPIVVRSLDTGKDPYRPKEDNEELLGPEVPYLSAIGALLYLAQCTRPDISFAVNLLA 65
PLSTP+VVRSL+ DP+RP E+NEE+LGPE PYLSAIGAL+YLA CTRPDISFAVNLLA
Sbjct: 202 PLSTPMVVRSLNVENDPFRPSEENEEILGPETPYLSAIGALMYLANCTRPDISFAVNLLA 261
Query: 66 RFSSALTKRHWMGVKQILRYLRGTTDMGLFYPKSPSNGSQVIGYTDAGYLFDPHKGVSQT 125
RFSS+ T+RHW G+K + RYL+GTTD+GLFYPKS S G Q+IG+ DAGYL DPHK SQT
Sbjct: 262 RFSSSPTRRHWNGIKHVFRYLQGTTDLGLFYPKS-SKG-QMIGFADAGYLSDPHKARSQT 319
Query: 126 GYVFTSGGTAFSWRSSKQSMPATSSNHSEIIALHEATRECVWLRSIISHIKISCDISRIT 185
GYVFT GGTA SWRS KQ++ ATSSNH+EIIALHEA+RECVWLRSI HI S I T
Sbjct: 320 GYVFTIGGTAISWRSQKQTLVATSSNHAEIIALHEASRECVWLRSISRHICSSSGIGENT 379
Query: 186 K 186
+
Sbjct: 380 E 380