BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0020.1
(124 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_011468499.1 PREDICTED: uncharacterized protein LOC101309181 [... 62 6e-09
XP_013615151.1 PREDICTED: uncharacterized protein LOC106321431 [... 58 2e-07
OAY82899.1 putative ribonuclease H protein [Ananas comosus] 56 2e-07
>XP_011468499.1 PREDICTED: uncharacterized protein LOC101309181 [Fragaria vesca
subsp. vesca]
Length = 340
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 1 MRDADANFIMAVADIVRGQHAEECESLAILYGLLSAMQLQLSYVHLESDNKAIIQALNGE 60
R++D N I+A A + E+ A+ L+ A V +E D+K +I A+NG+
Sbjct: 189 FRNSDGNVILAAAKGLGSTTIPTAEATALRDNLVKARDRGYMNVQVEGDSKLVIDAINGK 248
Query: 61 EGCIQWQSQSIIRQIKDIKDNFSGIIFSHVSRNGNNYADALAKWGRSHGCKKLWND 116
W+ Q I++ I+ I +FS + F+HV R N ADA A G + W D
Sbjct: 249 LSP-PWRLQKIVQDIRTIATSFSSVCFNHVYREANFVADAFANEGHQLPNGREWQD 303
>XP_013615151.1 PREDICTED: uncharacterized protein LOC106321431 [Brassica oleracea
var. oleracea]
Length = 545
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 25 ESLAILYGLLSAMQLQLSYVHLESDNKAIIQALNGEEGCIQWQSQSIIRQIKDIKDNFSG 84
E+LA+ LL A L LS + L+SDN+ +++ALN ++ ++ ++ I+++ +F
Sbjct: 277 EALAVREALLHAKALHLSNICLKSDNQVLVKALNSKQHPVELYGINL--DIENLSSSFCS 334
Query: 85 IIFSHVSRNGNNYADALAKWGRSH 108
I F HVSRN N+ ADALAK H
Sbjct: 335 ISFVHVSRNLNSAADALAKSAMKH 358
>OAY82899.1 putative ribonuclease H protein [Ananas comosus]
Length = 181
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 2 RDADANFIMAVADIVRGQHAEECESLAILYGLLSAMQLQLSYVHLESDNKAIIQALNGE- 60
RD + +F+ A A RG E I L A + L V LESD+ + + + G
Sbjct: 38 RDCNGHFLFAGASDCRGVDPLYSELCGIRSALTEAKKAGLPRVILESDSSSAVHLVGGGI 97
Query: 61 EGCIQWQSQSIIRQIKDIKDNFSGIIFSHVSRNGNNYADALAKWGRSHG 109
S+ +++Q +D++D+F II H R GN+ AD LA GR G
Sbjct: 98 SKNAPRGSKQLVQQCQDLRDSFPEIIIQHTYREGNSVADRLAVVGRQSG 146