BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0390.1
(538 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU36844.1 hypothetical protein TSUD_213680 [Trifolium subterran... 204 5e-53
GAU51253.1 hypothetical protein TSUD_412460, partial [Trifolium ... 184 2e-47
ABA98491.1 retrotransposon protein, putative, unclassified [Oryz... 185 2e-46
>GAU36844.1 hypothetical protein TSUD_213680 [Trifolium subterraneum]
Length = 1025
Score = 204 bits (518), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 270/582 (46%), Gaps = 55/582 (9%)
Query: 1 LDKYLGTHLFIGANKRKLFSSLTSQIQLKLSKWQASLLSPAGRSIVIQTIAAAVPRYQMQ 60
L KYLG ++ G + R F + +IQ +LS W+ LS AGR + +++ +++P Y MQ
Sbjct: 431 LGKYLGANIAPGRSTRGKFQHIIGKIQNRLSGWKQQCLSFAGRLTLSKSVLSSIPYYHMQ 490
Query: 61 CFALPKGISDRIEVLQRTFWW---EKSKYIHTINWSAICLPKKLGGLGFRFPILDNKAFL 117
LPK + D +E +QR F W E+ + H I W CL K GGLG + P L N+AFL
Sbjct: 491 YAKLPKTLCDDMEKIQRGFLWGDKEEQRKPHLIGWDICCLSKNDGGLGIKSPHLMNEAFL 550
Query: 118 SKLVWRLLKDPGSPWANILKAKYFTKDQKPKK--AKNHHSWLWKSLSKHVDKVANLMFWD 175
K++W L+ P W +L +KY K + ++ + S LWK+L+ ++ N + W
Sbjct: 551 MKILWNLINKPDDLWCQVLYSKYGRKIDLRFEIISQPYDSPLWKALTGIWEQFQNHIVWQ 610
Query: 176 VNKGTNINI-----------------CDICNSILSI--NLQEQLEDTARWTLTKSGKITI 216
+ G NIN +I + I++I L +DT W T + TI
Sbjct: 611 LRDGNNINFWMDKWTPSGSPLMTHLSPNIVSQIMAIPAPLGTDGDDTIGWKGTNTHHFTI 670
Query: 217 KSMYYYLRTEHHAYETKEWNFIWNLPIQPKIKLFLWKCCTNSLPV---RGKIGQFIGQMF 273
+S Y H + +WN IW +I+ F+W L R K G +G
Sbjct: 671 QSTYDLQHGNGH-HINGDWNKIWAWKGPHRIQTFMWIAAHARLLTNVRRSKWG--VGVSP 727
Query: 274 ECVYC-RAHESLTHALLHCELATAVWFHFSILSCNITNLY------DWI---ISWKNIDG 323
C C E++ H L C AT +W + S ITN + +WI ++ KN
Sbjct: 728 TCSICGNDDETMIHTLRDCIYATGIWLRL-VSSNQITNFFSSFDCREWIFLNLNTKNFGN 786
Query: 324 QTS---SLFANILWQIW----KARCDRCFSKVNTLPMMVIDQVKRTPNLLKHQNPTK-PK 375
Q S+F + W IW KA + F + N P VI ++ + KH T +
Sbjct: 787 QQESWKSIFMVVCWHIWTWRNKAIFEEDFQRPND-PSQVILRMTKDIKHYKHTLMTGIRR 845
Query: 376 ERDSL---WAPPKAPFIKVNVDASFLEGTVMAGIGCIMYDDHANFLAASACNFRGQNAEE 432
+R+++ W P +IK+N D ++ + +AG G + D +L +A
Sbjct: 846 QRETIYIGWKYPHGDWIKLNCDGAYKDSMNIAGCGGLFRDSDGRWLKGYTLRIGDCDALH 905
Query: 433 CESWAIVKALQWSSYQKVEYLHIESDNSNIVQTLNGAQVNLSWQASKLIGKIRSLEGHFS 492
E W + ++ + Q +L +ESD+ ++ + G + L+ + L+ +I+ L
Sbjct: 906 AEMWGMYTGMKMARRQGYTHLIVESDSKLLIDMVTG-RCKLNGNSPILVKRIQDLSNLQW 964
Query: 493 KVLYTHINREGNEKADILAKWSRMNLGNWIWRALSDLPKSLR 534
V++ H REGN AD LA +S +N ++ R L + P+ L+
Sbjct: 965 HVIFQHTWREGNRCADWLASFS-LNQSSYDVRILENPPRELQ 1005
>GAU51253.1 hypothetical protein TSUD_412460, partial [Trifolium subterraneum]
Length = 609
Score = 184 bits (466), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 154/583 (26%), Positives = 251/583 (43%), Gaps = 58/583 (9%)
Query: 1 LDKYLGTHLFIGANKRKLFSSLTSQIQLKLSKWQASLLSPAGRSIVIQTIAAAVPRYQMQ 60
L KYLG A KR F+ L +I+ +LS W+A LS AGR + +++ A+P Y M
Sbjct: 26 LGKYLGVPALDKAPKRGDFNYLIEKIKSRLSGWKAKQLSLAGRITLSKSVIQAIPVYPMM 85
Query: 61 CFALPKGISDRIEVLQRTFWW---EKSKYIHTINWSAICLPKKLGGLGFRFPILDNKAFL 117
++PK IE +QRTF W E+ + H I W+ + LPK++GGLG R N AFL
Sbjct: 86 STSIPKSCLHEIEKIQRTFIWGHSEEGRKAHMIGWNQVTLPKEMGGLGIRKLAPMNDAFL 145
Query: 118 SKLVWRLLKDPGSPWANILKAKYFTK--DQKPKKAKNHHSWLWKSLSKHVDKVANLMFWD 175
K W L S WA +L+ KY + S LWK++ + + + WD
Sbjct: 146 MKFGWSLRMGERSLWAQVLRGKYGRNIIEHGEVMICATDSSLWKTIGRLWPFMTGIQCWD 205
Query: 176 VNKGTNINICDICNSILSINLQEQLE----------------------DTARWTLTKSGK 213
+ GT I+ + + L+E +E DT W + G
Sbjct: 206 IGNGTQISFWEDIWIDKKLRLREVVETIPDDKRNWRLCDAVTEDDNGPDTPLWPGERMGN 265
Query: 214 ITIKSMYYYLRTEHHAYETKEWNFIWNLPIQPKIKLFLWKCCTNSLPVRGKIGQFIGQMF 273
++ + Y YL H K+W IW L +I++F+W+ + + + ++
Sbjct: 266 FSVATAYQYLTGVHLREYEKKWFKIWRLETTERIRVFMWQVLHDRILTNWRTAKWNLTDP 325
Query: 274 ECVYCRAHESLT-HALLHCELATAVWFHFSILSCN----ITNLYDWI-ISWKNIDGQTSS 327
C YC E T H L C LA VW H I L+ WI ++ G
Sbjct: 326 YCSYCEHMEETTLHVLRDCPLAVEVWQHLLEEEHRGRFFIGQLHQWIDLNLSTSIGIRRD 385
Query: 328 LFANILWQ-----IWKARCDRCFSKVNT-------LPMMVIDQVKRTPNLLKHQNPTKPK 375
L + +W +WK R R +T + ++++ K T + + P + +
Sbjct: 386 LDWDAVWVTTCFWLWKWRNKRVHEPNHTSQWKPWSFILNLVNEYKYTKQARETEKPCQKE 445
Query: 376 ERDSLWAPPKAPFIKVNVDASFLEGTVMAGIGCIMYDDHANFLAASACNFRGQNAEECES 435
+D W P ++ +N D + T +AG G I+ +D+ ++ + +A E
Sbjct: 446 LKDIKWIYPAKGWVCLNTDGAAKSDTGIAGCGGILRNDNGIWICGFSKFLGNTSAYMAEV 505
Query: 436 WAIVKALQWSSYQKVEYLHIESDNSNIVQTL--NGAQVNLSWQASKLIGKIRSLEGHFSK 493
W + + L + +E L ++ D+ +V +G +SW ++ +IR+L +
Sbjct: 506 WGLYEGLSMARNLGIERLEVQVDSEVLVMATKKDGTGCTMSWN---IMRRIRALLDLNWE 562
Query: 494 VLYTHINREGNEKADILAKWSRMNLG---NWIWRALSDLPKSL 533
V HI EGN AD+LA N+G + +W + P L
Sbjct: 563 VRIKHIFCEGNRCADVLA-----NMGCNQDAVWMPYQESPAEL 600
>ABA98491.1 retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/554 (26%), Positives = 244/554 (44%), Gaps = 86/554 (15%)
Query: 2 DKYLGTHLFIGANKRKLFSSLTSQIQLKLSKWQASLLSPAGRSIVIQTIAAAVPRYQMQC 61
++YLG +F+G ++ K+FS L +I ++ W+ LLS AG+ I+I+ +A A+P + M C
Sbjct: 1004 ERYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGC 1063
Query: 62 FALPKGISDRIEVLQRTFWW---EKSKYIHTINWSAICLPKKLGGLGFRFPILDNKAFLS 118
F L K + D+I + +WW EK +H ++W+ + LPK +GGLGFR + N A L+
Sbjct: 1064 FELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLA 1123
Query: 119 KLVWRLLKDPGSPWANILKAKYFTKDQ--KPKKAKNHHSWLWKSLSKHVDKVANLMFWDV 176
K WRL++DP S + +L+AKYF +PK+ N S+ W+S+ K + + N M W V
Sbjct: 1124 KQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSN-VSYTWRSIQKGLRVLQNGMIWRV 1182
Query: 177 NKGTNINI-----------------------------------------------CDICN 189
G+ INI +
Sbjct: 1183 GDGSKINIWADPWIPRGWSRKPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVA 1242
Query: 190 SILSINLQEQLEDTARWTLTKSGKITIKSMYYYLRT-EHHA----------YETKE---W 235
+I SI + ++ED W G T+KS Y R E A +E+ + W
Sbjct: 1243 AIKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFW 1302
Query: 236 NFIWNLPIQPKIKLFLWKCCTNSLPVRGKI-GQFIGQMFECVYC-RAHESLTHALLHCEL 293
+W L + KIK FLW+ C N+L +R + + + CV C R +E H C+
Sbjct: 1303 KKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKP 1362
Query: 294 ATAVWFHFSILSCNITNLYDWIISWKNI---------DGQTSSLFANILWQIWKARCDRC 344
VW ++ + ++ + S KN+ + +TS++ LWQ WK R +
Sbjct: 1363 VKKVWQALNLE--ELRSMLEQQTSGKNVLQSIYCRPENERTSAIVC--LWQWWKERNEVR 1418
Query: 345 FSKVNTLPMMVIDQVKRTPNLLKHQNPTKPKERD---SLWAPPKAPFIKVNVDASFLEGT 401
+ P + + N + R ++W P F+K+N D ++
Sbjct: 1419 EGGIPRSPAELSHLIMSQAGEFVRMNVKEKSPRTGECAVWRRPPLNFVKINTDGAYSSNM 1478
Query: 402 VMAGIGCIMYDDHANFLAASACNFRG-QNAEECESWAIVKALQWSSYQKVEYLHIESDNS 460
G G ++ D L A A Q+A E A A++ +S + + + +E+D+
Sbjct: 1479 KQGGWGFVIKDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASERGMSRIELETDSM 1538
Query: 461 NIVQTLNGAQVNLS 474
+ + NLS
Sbjct: 1539 MLRYAIQDNSFNLS 1552