BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0460.1
(256 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP38661.1 Retrovirus-related Pol polyprotein from transposon TN... 160 2e-41
KYP34377.1 Retrovirus-related Pol polyprotein from transposon TN... 157 2e-40
KYP70979.1 hypothetical protein KK1_010221 [Cajanus cajan] 143 3e-39
>KYP38661.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 778
Score = 160 bits (405), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/144 (54%), Positives = 103/144 (71%), Gaps = 6/144 (4%)
Query: 109 SNELNSNDTTDLIDHPPTR-PQRSRRPPSHLNDYVC-MTQSNVPYPLENYMSINSFSAPH 166
SN+++S +T+ PPT Q RRPP HL DYVC +S +PL NY+S+++ S H
Sbjct: 269 SNDISSTETS----LPPTNHSQHPRRPPHHLKDYVCNHIKSITNFPLANYLSLSNLSNSH 324
Query: 167 RVFLYSVISTTEPSSFTQAMKLPHWREAMANEIKALESNNTWSVVPLPSRKRLIGCKWVY 226
+ FL ++I EP SF+QAMK WREAMA EI+ALESNNTWS+ PLP K IGCKWVY
Sbjct: 325 QAFLTNIIDNQEPKSFSQAMKSAEWREAMAKEIQALESNNTWSLCPLPQGKSSIGCKWVY 384
Query: 227 KVKFKSDGSVEHYKARLVARVHSN 250
K+K++SDGS+E YKARLVA+ ++
Sbjct: 385 KIKYRSDGSIERYKARLVAKGYAQ 408
>KYP34377.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 938
Score = 157 bits (398), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 94/128 (73%), Gaps = 2/128 (1%)
Query: 124 PPTR-PQRSRRPPSHLNDYVC-MTQSNVPYPLENYMSINSFSAPHRVFLYSVISTTEPSS 181
PPT QR RRPP HL DYVC +S +PL NY+S+++ S H+ FL ++I EP S
Sbjct: 566 PPTNHSQRPRRPPHHLKDYVCNHIKSTTNFPLANYLSLSNLSNFHQPFLTNIIGNQEPKS 625
Query: 182 FTQAMKLPHWREAMANEIKALESNNTWSVVPLPSRKRLIGCKWVYKVKFKSDGSVEHYKA 241
F+QAMK WREAMA EI+ALESNNTWS+ PLP K IGCKWVYK+K++SDGS+E YKA
Sbjct: 626 FSQAMKSAEWREAMAKEIQALESNNTWSLCPLPQGKSSIGCKWVYKIKYRSDGSIERYKA 685
Query: 242 RLVARVHS 249
LVA+ ++
Sbjct: 686 CLVAKGYT 693
>KYP70979.1 hypothetical protein KK1_010221 [Cajanus cajan]
Length = 185
Score = 143 bits (360), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 95/140 (67%), Gaps = 6/140 (4%)
Query: 113 NSNDTTDLIDHPPTRPQRSRRPPSHLNDYVCMTQSNV------PYPLENYMSINSFSAPH 166
+SND ++D P R R+PP++L+DY C T S+ PYPL +Y+S ++ S H
Sbjct: 6 DSNDAVQIVDQPARISTRPRKPPAYLSDYDCPTLSSANTSCCTPYPLHSYLSYSNCSDSH 65
Query: 167 RVFLYSVISTTEPSSFTQAMKLPHWREAMANEIKALESNNTWSVVPLPSRKRLIGCKWVY 226
F S+ +T EP+SF +A + HW++AM EI+ALE N TWS+V LP +KR++GCKWVY
Sbjct: 66 TAFCMSLSATIEPTSFKEACQHDHWQQAMLAEIQALERNKTWSLVRLPPKKRVVGCKWVY 125
Query: 227 KVKFKSDGSVEHYKARLVAR 246
K K +DGS+E +KARLVA+
Sbjct: 126 KTKLNADGSIERHKARLVAK 145