BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0920.1
(246 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP63120.1 Retrovirus-related Pol polyprotein from transposon TN... 377 e-127
BAA11674.1 unnamed protein product [Nicotiana tabacum] 393 e-125
XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein fro... 377 e-120
>KYP63120.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 501
Score = 377 bits (968), Expect = e-127, Method: Compositional matrix adjust.
Identities = 175/246 (71%), Positives = 208/246 (84%)
Query: 1 MKDLGPAKQILGMHISHDRKAGKLWLSQERYIEKVLERFNMDKTKPVSCPLASDFKLTCN 60
MKDLGPAKQILGM I+ DR LWLSQERYIEKVLE+FNMDK KPV+ PLA F+L+
Sbjct: 206 MKDLGPAKQILGMRITRDRSKRLLWLSQERYIEKVLEQFNMDKCKPVNTPLAGHFRLSSK 265
Query: 61 QCPSTKSEKEEMEKIPHASAIGSLMYAMVCTRPNIAFAVGVVSRFLANPGKEHWLAVKWI 120
Q P+++ E EEM+KIP++S +GSLMYAM+CTRP+IA+AVGVVSRFLANPG EHWLAVKWI
Sbjct: 266 QSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDIAYAVGVVSRFLANPGNEHWLAVKWI 325
Query: 121 LKYLRGTSKARICFVNDKPVLVGYTDADMVGDVDSKRSTSGYLFTLSGGAVSWQSKLQMC 180
L+YLRGTSK +CF KPVL GYTDAD+ GD+DS++STSGYL T GGAVSWQSKLQ C
Sbjct: 326 LRYLRGTSKRCLCFGKGKPVLEGYTDADLAGDIDSRKSTSGYLTTFVGGAVSWQSKLQKC 385
Query: 181 VALSTTEAEYIAITECCKEMLRMKRLLEELSMKQDNYVIHCDSQSAIHLSKNSSFHSKSR 240
VALSTTEAEYIA TE CKEML MK +L EL + Q+ YV+ CD+QSAI+L+KNS+FHS+++
Sbjct: 386 VALSTTEAEYIAATEACKEMLWMKNMLLELGVDQERYVLKCDNQSAIYLAKNSTFHSRTK 445
Query: 241 HINVRY 246
HI+ RY
Sbjct: 446 HIDTRY 451
>BAA11674.1 unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 393 bits (1010), Expect = e-125, Method: Compositional matrix adjust.
Identities = 183/246 (74%), Positives = 211/246 (85%)
Query: 1 MKDLGPAKQILGMHISHDRKAGKLWLSQERYIEKVLERFNMDKTKPVSCPLASDFKLTCN 60
MKDLGPAKQILGM I DR+A KLWLSQE+YIEKVL+RFNM+KTK VSCPLA+ F+L+
Sbjct: 1036 MKDLGPAKQILGMRIMRDREAKKLWLSQEKYIEKVLQRFNMEKTKAVSCPLANHFRLSTK 1095
Query: 61 QCPSTKSEKEEMEKIPHASAIGSLMYAMVCTRPNIAFAVGVVSRFLANPGKEHWLAVKWI 120
Q PST E+ +ME+IP+ASA+GSLMYAMVCTRP+IA AVGVVSRFL+NPGKEHW AVKWI
Sbjct: 1096 QSPSTDDERRKMERIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGKEHWDAVKWI 1155
Query: 121 LKYLRGTSKARICFVNDKPVLVGYTDADMVGDVDSKRSTSGYLFTLSGGAVSWQSKLQMC 180
L+YLRGTSK +CF D PVLVGYTDADM GDVDS++STSGYL SGGAVSWQSKLQ C
Sbjct: 1156 LRYLRGTSKLCLCFGEDNPVLVGYTDADMAGDVDSRKSTSGYLINFSGGAVSWQSKLQKC 1215
Query: 181 VALSTTEAEYIAITECCKEMLRMKRLLEELSMKQDNYVIHCDSQSAIHLSKNSSFHSKSR 240
VALSTTEAE+IA TE CKE++ MK+ L EL QD Y + CDSQSAIHL+KN+SFHS+S+
Sbjct: 1216 VALSTTEAEFIAATEACKELIWMKKFLTELGFSQDGYQLFCDSQSAIHLAKNASFHSRSK 1275
Query: 241 HINVRY 246
HI+VRY
Sbjct: 1276 HIDVRY 1281
>XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Gossypium arboreum]
Length = 1184
Score = 377 bits (968), Expect = e-120, Method: Compositional matrix adjust.
Identities = 169/246 (68%), Positives = 212/246 (86%)
Query: 1 MKDLGPAKQILGMHISHDRKAGKLWLSQERYIEKVLERFNMDKTKPVSCPLASDFKLTCN 60
MKDLGPAKQILG+ ++ DRKA KLWLSQERYIEKVL++F+MDK K V+ P A F+L+
Sbjct: 889 MKDLGPAKQILGIRLTRDRKAKKLWLSQERYIEKVLQKFSMDKAKAVNTPFAMHFRLSVK 948
Query: 61 QCPSTKSEKEEMEKIPHASAIGSLMYAMVCTRPNIAFAVGVVSRFLANPGKEHWLAVKWI 120
PST+ EKEEM+KIP++SA+GSLMYAMVCTRP++A+AVG VSRFL+N G+EHW AVKWI
Sbjct: 949 HSPSTEKEKEEMQKIPYSSAVGSLMYAMVCTRPDLAYAVGTVSRFLSNLGREHWNAVKWI 1008
Query: 121 LKYLRGTSKARICFVNDKPVLVGYTDADMVGDVDSKRSTSGYLFTLSGGAVSWQSKLQMC 180
++YLRGTS ++CF N+KPV VGYTD+DM GD+DS+RSTSGYL T +GGAV+WQS+ Q C
Sbjct: 1009 MRYLRGTSNMKLCFGNEKPVTVGYTDSDMAGDIDSRRSTSGYLITYAGGAVAWQSRQQKC 1068
Query: 181 VALSTTEAEYIAITECCKEMLRMKRLLEELSMKQDNYVIHCDSQSAIHLSKNSSFHSKSR 240
VALSTTE+E+IA TE CKEML MK+ ++EL Q+ YV++CDSQSAIHLSKNS+FH++S+
Sbjct: 1069 VALSTTESEFIAATEACKEMLWMKKFVQELGFTQEKYVLYCDSQSAIHLSKNSTFHARSK 1128
Query: 241 HINVRY 246
HI+VRY
Sbjct: 1129 HIDVRY 1134