BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g0940.1
(131 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP31853.1 Retrovirus-related Pol polyprotein from transposon TN... 208 5e-60
KYP66486.1 Retrovirus-related Pol polyprotein from transposon TN... 200 3e-57
CAN74160.1 hypothetical protein VITISV_018405 [Vitis vinifera] 198 1e-56
>KYP31853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1314
Score = 208 bits (529), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 107/130 (82%)
Query: 1 LKCIRTDNGGEYIGSFEEYCKTHGIRHEQTVPKTPQQNGVAERMNHTIVERIKCMLSEAK 60
LKCIRTDNGGEY+G FE YCKTHGIRHE+ PKTPQ NGVAERMN TI E+++ MLS AK
Sbjct: 538 LKCIRTDNGGEYLGPFEYYCKTHGIRHEKVPPKTPQMNGVAERMNRTIAEKVRSMLSHAK 597
Query: 61 LPKSFWGEAMRTACYLINLSPSTPLDGDVAERVWAGKEVSYGHLRVFSCRAFVHISKDQR 120
+PKSFWGEA+ TA LINLSPS PL+G++ E VW+GK+ YGHL+VF CRAFVHI KD+R
Sbjct: 598 IPKSFWGEAVLTAADLINLSPSRPLNGEIPEEVWSGKKAYYGHLKVFGCRAFVHIPKDER 657
Query: 121 AKFDDKAKQC 130
K D K K+C
Sbjct: 658 TKLDAKVKEC 667
>KYP66486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1321
Score = 200 bits (509), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 90/131 (68%), Positives = 107/131 (81%), Gaps = 1/131 (0%)
Query: 1 LKCIRTDNGGEYIG-SFEEYCKTHGIRHEQTVPKTPQQNGVAERMNHTIVERIKCMLSEA 59
LKCIRTDNGGEYI F++YC +GIRHE+TVP TPQ NG+AERMN TIVE+++CML A
Sbjct: 537 LKCIRTDNGGEYISKEFKDYCSKYGIRHEKTVPGTPQHNGIAERMNRTIVEKVRCMLRMA 596
Query: 60 KLPKSFWGEAMRTACYLINLSPSTPLDGDVAERVWAGKEVSYGHLRVFSCRAFVHISKDQ 119
KLPK FWGEA++TA YLIN PS PL D+ ERVWAGKEVSY HL+VF C+AF+H+ K+Q
Sbjct: 597 KLPKPFWGEAVQTAVYLINRLPSVPLGFDIPERVWAGKEVSYSHLKVFGCKAFMHVPKEQ 656
Query: 120 RAKFDDKAKQC 130
R+K DDKA C
Sbjct: 657 RSKLDDKAIPC 667
>CAN74160.1 hypothetical protein VITISV_018405 [Vitis vinifera]
Length = 1302
Score = 198 bits (504), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 108/130 (83%)
Query: 1 LKCIRTDNGGEYIGSFEEYCKTHGIRHEQTVPKTPQQNGVAERMNHTIVERIKCMLSEAK 60
LKCIRTDNGGEY G F+EYC+ HGIRH++T PKTPQ NG+AERMN T+VER++C+LS+++
Sbjct: 409 LKCIRTDNGGEYSGPFDEYCRQHGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSQSQ 468
Query: 61 LPKSFWGEAMRTACYLINLSPSTPLDGDVAERVWAGKEVSYGHLRVFSCRAFVHISKDQR 120
LP+SFWGEA+ T +++NL+P PL+ DV +R+W+ E+SY HLRVF C+AFVHI KD+R
Sbjct: 469 LPRSFWGEALNTVVHVLNLTPCVPLEFDVPDRIWSNNEISYDHLRVFGCKAFVHIPKDER 528
Query: 121 AKFDDKAKQC 130
+K D K + C
Sbjct: 529 SKLDAKTRPC 538