BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1040.1
(608 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN... 414 e-133
JAT57914.1 Retrovirus-related Pol polyprotein from transposon TN... 385 e-124
ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 cop... 373 e-112
>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 414 bits (1063), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/512 (43%), Positives = 334/512 (65%), Gaps = 20/512 (3%)
Query: 32 IREYEIENFNGKNDFSYWRLQMKNLLISQKLHKTL--TEKKPGDMSEEDWEELDLEARAT 89
+ +++IE F+GK FS W++QMK +L L K L KKP +M++E W+ELD +A +
Sbjct: 4 VTKFDIEKFDGKICFSIWKVQMKAVLTQNGLKKALDGKAKKPVNMTDEQWDELDEKALSA 63
Query: 90 IMLCLERYVAFLVDKETTAASVWLKLESNFMTKTLTNRVYFKSKLFTCRMEEGSSIQEYV 149
I LCL + V V ETTAA++WLKLES +MTK+L N++ K +L+T RM EG+ IQ ++
Sbjct: 64 IQLCLSKEVLREVANETTAAALWLKLESLYMTKSLANKLRLKERLYTIRMVEGTPIQSHL 123
Query: 150 NRFDRIISDLKDIDVKVEDEDQALILLLSLSKSYENFVQTLMLVG-DSLSMEETKNSLLA 208
N F+ II DL++I++K++DED+A++L++SL +Y++F + ++ D+LS E+ K++LL+
Sbjct: 124 NEFNSIIMDLENIEIKIDDEDKAVLLIVSLPSTYKHFKEIMLYSNNDTLSFEDVKSNLLS 183
Query: 209 DDLRNVANSSMTSGGVDKDQAQGLFVTRGRSNERGKGKGGKSRGSFK-----KTCFSCGE 263
+ ++ S +D+ +GL V RGR+ E+G KSR + KTC C +
Sbjct: 184 KEKFDLDIHS-------EDKGEGLSV-RGRTQEKGSTSNKKSRSKSRGRKSNKTCRYCKK 235
Query: 264 LGHSKAACPKRKLKQKTEGYKGKQEMQEAGYVSEDPDECFSVTEVSEKISD-KWMLDSEA 322
GH + C K KQ+ + KGK EA V D D ++ S+K S +W+LDS
Sbjct: 236 FGHDISDCFILKKKQERQ-EKGKNP-AEAANVETDSDGDVMISVSSDKRSKTEWILDSGC 293
Query: 323 SHHLCPTREWFTTYRSIDGGTVILGDDSICKTVGLETIRIKMHDRVVRTLTDVRHIPDLQ 382
+ H+CP ++ FTT +D G V++G+D+ CK G+ TI+IK HD ++TL++VR IPDL+
Sbjct: 294 TFHMCPYKDLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLK 353
Query: 383 KNLISLGVLERNGCKIIIENGSIKVVKGSLVVMRGTRYGNLYKLLRTTITEDVAVGISER 442
+NLISLG LE GCK E G +KV KG++V+++ R G+LY L + +T AV S
Sbjct: 354 RNLISLGTLESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMS 413
Query: 443 DPTASTRLWHMRLGHMSEKGLSLMCGKGLLKDMKKPWMEFCEHCVFGKAHRVTFSTSKHK 502
D A T+LWHMRLGHMSEKG+ L+ +GLL + +EFCEHCVFGK RV+FST+ H+
Sbjct: 414 DKDA-TKLWHMRLGHMSEKGMHLLSKQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTATHR 472
Query: 503 SKEVLDYVHTDVWGPAKLASKGGSRSPHSSLD 534
+K LDY+H+D+WGP+K+ S GG R + +D
Sbjct: 473 TKGTLDYIHSDLWGPSKVPSYGGCRYMMTIID 504
>JAT57914.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 529
Score = 385 bits (989), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/508 (42%), Positives = 333/508 (65%), Gaps = 15/508 (2%)
Query: 34 EYEIENFNGKNDFSYWRLQMKNLLISQKLHKTL--TEKKPGDMSEEDWEELDLEARATIM 91
++EIE F+ F W+++M+ +L Q L K L EK +S+E+ +++D A A I
Sbjct: 4 KFEIEKFDRNISFGIWQVKMRAILTQQGLQKALLGIEKMSSTLSQEEKQDMDERALAVIQ 63
Query: 92 LCLERYVAFLVDKETTAASVWLKLESNFMTKTLTNRVYFKSKLFTCRMEEGSSIQEYVNR 151
LCL V V E +AA++WLKLES +MTK+LT++++ K +LF +M EG+S++ +++
Sbjct: 64 LCLSNEVLREVIHEKSAAALWLKLESLYMTKSLTSKLHLKQRLFMLKMVEGTSVKTHLDE 123
Query: 152 FDRIISDLKDIDVKVEDEDQALILLLSLSKSYENFVQTLMLVGDSLSMEETKNSLLADDL 211
F+ I+ DL++++VK+EDEDQAL+LL SL S+++F +TL+ DS+S+E+ K+SL + +L
Sbjct: 124 FNSILMDLENLEVKIEDEDQALLLLCSLPPSFKHFRETLLYGRDSISVEDVKSSLFSKEL 183
Query: 212 RNVANSSMTSGGVDKDQAQGLFVTRGRSNERG--KGKG---GKSRGSFKKTCFSCGELGH 266
+ + +S GV ++GL V RGRS ER K KG KSR FK C C GH
Sbjct: 184 MDRDLTGCSSEGV----SEGL-VARGRSQERSFEKKKGERRSKSRNKFK-ICNYCKMKGH 237
Query: 267 SKAACPKRKLKQKTEGYKGKQEMQEAGYVSEDPDECFSVTEVSEKISDKWMLDSEASHHL 326
K+ C LK K + + E V++D E + ++ + + +D+W+LDS S+H+
Sbjct: 238 IKSEC--YGLKNKQKKEEKNPEKAAEVGVAKDECEDYVLSVNAVRSNDEWILDSGYSYHM 295
Query: 327 CPTREWFTTYRSIDGGTVILGDDSICKTVGLETIRIKMHDRVVRTLTDVRHIPDLQKNLI 386
CP ++ F TY DGG V++G+++ KT+G+ +IRIKM+D +VRTLT VRH+ DL+KNLI
Sbjct: 296 CPYKDRFHTYEHDDGGVVLMGNNAPRKTIGIGSIRIKMYDGIVRTLTQVRHVLDLKKNLI 355
Query: 387 SLGVLERNGCKIIIENGSIKVVKGSLVVMRGTRYGNLYKLLRTTITEDVAVGISERDPTA 446
SLG LE NGCK E G ++V +G+L++M+ R +LY L+ TT+T A +
Sbjct: 356 SLGTLEANGCKYSAEGGVLRVSRGALILMKVKRTNSLYTLIGTTVTGAAAAVSPSMSESE 415
Query: 447 STRLWHMRLGHMSEKGLSLMCGKGLLKDMKKPWMEFCEHCVFGKAHRVTFSTSKHKSKEV 506
T+LWHMRLGHMSEKG++++ +GLL +EFCEHC+FGK +V+F T+ H++K
Sbjct: 416 VTKLWHMRLGHMSEKGMTMLSKRGLLCGQSTGKVEFCEHCIFGKQRKVSFQTTIHRTKAT 475
Query: 507 LDYVHTDVWGPAKLASKGGSRSPHSSLD 534
LDY+H+D+WGPA++ SKGG+R + +D
Sbjct: 476 LDYIHSDLWGPARVPSKGGARYFLTFID 503
>ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 copia LTR rider
[Solanum lycopersicum]
Length = 1307
Score = 373 bits (958), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/508 (40%), Positives = 309/508 (60%), Gaps = 26/508 (5%)
Query: 36 EIENFNGKNDFSYWRLQMKNLLISQKLHKTLTEKKPGDMSEEDWEELDLEARATIMLCLE 95
+I+ F G+N FS W+++M+ LL Q L++ K ++ E L+ +A +TIMLCL
Sbjct: 7 KIDKFTGRNSFSLWQIKMRALLKQQGFWAPLSKDKNAVVTPE-MAILEEKAHSTIMLCLA 65
Query: 96 RYVAFLVDKETTAASVWLKLESNFMTKTLTNRVYFKSKLFTCRMEEGSSIQEYVNRFDRI 155
V V E TAA +WLKLES +MTK+LTN++ K +LF RM EG+ ++E++ + + +
Sbjct: 66 DDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAEGTQLREHLEQLNTL 125
Query: 156 ISDLKDIDVKVEDEDQALILLLSLSKSYENFVQTLMLVGDSLSMEETKNSLLADDLRNVA 215
+ +L++IDVK+EDED ALILL+SL S+ENFVQ+ ++ D++S+EE +++L + +LR+ A
Sbjct: 126 LLELRNIDVKIEDEDAALILLVSLPMSFENFVQSFIVGKDTVSLEEVRSALHSRELRHKA 185
Query: 216 NSSMTSGGVDKDQAQGLFVTRGRSNERGKGKGGKSRGSFKK------TCFSCGELGHSKA 269
N + T Q GLF S+ +G+ GGK K C C E GH K
Sbjct: 186 NGTSTD-----IQPSGLFT----SSRKGRKNGGKKNKPMSKGAKPDDVCNYCKEKGHWKF 236
Query: 270 ACPKRKLKQKTEGYKGKQEMQEAGYVSEDPDECFSVTEVSEKI---SDKWMLDSEASHHL 326
CPK+K + + + A ED + + V+++ SD W+LDS AS+H+
Sbjct: 237 DCPKKKKQSEKQSV-------SAAVAEEDTNSEEDIALVADEHTHHSDVWVLDSGASYHI 289
Query: 327 CPTREWFTTYRSIDGGTVILGDDSICKTVGLETIRIKMHDRVVRTLTDVRHIPDLQKNLI 386
CP REWFTTY +DGG++ + + S+CK VG +I+I+ HD TL +VRH+P + KNLI
Sbjct: 290 CPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLI 349
Query: 387 SLGVLERNGCKIIIENGSIKVVKGSLVVMRGTRYGNLYKLLRTTITEDVAVGISERDPTA 446
SL +L+ G ++G ++V KGS ++++G G LY L +T+T V SE
Sbjct: 350 SLSLLDSKGFSWSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTVTGSAHVASSEFHQKD 409
Query: 447 STRLWHMRLGHMSEKGLSLMCGKGLLKDMKKPWMEFCEHCVFGKAHRVTFSTSKHKSKEV 506
T+LWH+RLGHM E+G+ ++ + LL K +EFCEHCVFGK HR F + H++K
Sbjct: 410 MTKLWHIRLGHMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGT 469
Query: 507 LDYVHTDVWGPAKLASKGGSRSPHSSLD 534
LDY+H+D WGP ++ S GG R S +D
Sbjct: 470 LDYIHSDCWGPCRVESLGGCRFFVSIID 497