BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1050.1
(108 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013653992.1 PREDICTED: uncharacterized protein LOC106358726 [... 169 2e-48
ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 cop... 173 4e-48
KYP47640.1 Retrovirus-related Pol polyprotein from transposon TN... 170 5e-47
>XP_013653992.1 PREDICTED: uncharacterized protein LOC106358726 [Brassica napus]
Length = 461
Score = 169 bits (427), Expect = 2e-48, Method: Composition-based stats.
Identities = 78/108 (72%), Positives = 95/108 (87%)
Query: 1 MKEDSSEIKGTRYKARLVAKGYAQKEGVDYNEIFSPVVKHTSIQVLLSIVAHGDLELEQL 60
+KE S +G +YK+R+VA+G++Q+EGVDYNEIFSPVV+HTSI++LL+IVA DLELEQL
Sbjct: 296 LKEGQSPEEGVKYKSRVVARGFSQREGVDYNEIFSPVVRHTSIRMLLAIVARQDLELEQL 355
Query: 61 DVKTAFLHGDLEEEIYMAQPEGYKVEDKENQVCRLRKSLYGLKQSPRQ 108
DVKTAFLHG+LEEEIYM QPEG+ KE+ VC+LRKSLYGLKQSPRQ
Sbjct: 356 DVKTAFLHGELEEEIYMTQPEGFLFPGKEDHVCKLRKSLYGLKQSPRQ 403
>ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 copia LTR rider
[Solanum lycopersicum]
Length = 1307
Score = 173 bits (438), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 80/107 (74%), Positives = 96/107 (89%)
Query: 2 KEDSSEIKGTRYKARLVAKGYAQKEGVDYNEIFSPVVKHTSIQVLLSIVAHGDLELEQLD 61
KE S +G +YKAR+VA+G+ Q+EGVDYNEIFSPVV+HTSI+VLL+IVAH +LELEQLD
Sbjct: 844 KEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLD 903
Query: 62 VKTAFLHGDLEEEIYMAQPEGYKVEDKENQVCRLRKSLYGLKQSPRQ 108
VKTAFLHG+LEEEIYM QP+G++V KEN VC+L+KSLYGLKQSPRQ
Sbjct: 904 VKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQ 950
>KYP47640.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1032
Score = 170 bits (430), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 81/105 (77%), Positives = 92/105 (87%), Gaps = 3/105 (2%)
Query: 4 DSSEIKGTRYKARLVAKGYAQKEGVDYNEIFSPVVKHTSIQVLLSIVAHGDLELEQLDVK 63
D SE+ RYKARLVAKGYAQKEG+DYNE+FSPVVKH+SI+VLL++VA D+EL Q+DVK
Sbjct: 637 DKSEV---RYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRVLLALVAQLDMELVQMDVK 693
Query: 64 TAFLHGDLEEEIYMAQPEGYKVEDKENQVCRLRKSLYGLKQSPRQ 108
TAFLHGDLEEEIYM QPEG+KV KEN C+L KSLYGLKQSPRQ
Sbjct: 694 TAFLHGDLEEEIYMTQPEGFKVAGKENMFCKLEKSLYGLKQSPRQ 738