BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1100.1
(201 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABG22123.1 polyprotein, partial [Prunus avium] 285 1e-94
KOM58517.1 hypothetical protein LR48_Vigan11g155100 [Vigna angul... 282 3e-94
AAK70406.1 pol polyprotein [Citrus x paradisi] 285 5e-94
>ABG22123.1 polyprotein, partial [Prunus avium]
Length = 276
Score = 285 bits (730), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 134/177 (75%), Positives = 154/177 (87%), Gaps = 3/177 (1%)
Query: 1 MDRVPYASAVGSLMYAMVCTRPDISQAVGMVSRFMANPGKTHWEAVKWVLRYLKGTVDTG 60
M ++PYASAVGSLMYAMVCTRPDISQAV +VSR+M NPGK HW+AVKW+LRY+ GTVD G
Sbjct: 100 MAQIPYASAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYILGTVDVG 159
Query: 61 LCFGGDTCQ---VSGYVDSDYAGDLDRRRSTTGYVFKVHGAPVSWRSMLQSTVALSTTEA 117
L F D V GYVDSDYAGDLD+RRSTTG+VF + G PVSWRS+LQSTVALSTTEA
Sbjct: 160 LLFQQDKVSGQCVVGYVDSDYAGDLDKRRSTTGFVFTIAGGPVSWRSILQSTVALSTTEA 219
Query: 118 EYMAMAEGVKEALWLWGLLDDLGIKQECVDVWCDSQSAIHLAKNQIHHARTKHIDVR 174
EYMA+ E +KEA+WL GLLDDLG++Q+ VDV+CDSQSAI+LAKNQ+HHARTKHIDVR
Sbjct: 220 EYMAVTEAIKEAIWLQGLLDDLGVQQDHVDVYCDSQSAIYLAKNQVHHARTKHIDVR 276
>KOM58517.1 hypothetical protein LR48_Vigan11g155100 [Vigna angularis]
Length = 225
Score = 282 bits (722), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 159/197 (80%)
Query: 1 MDRVPYASAVGSLMYAMVCTRPDISQAVGMVSRFMANPGKTHWEAVKWVLRYLKGTVDTG 60
+ RVPYASAVGSLMYAM+CTRPDI+ AVG VSRFMANPG+ HW AVK VLRY+KGT D
Sbjct: 3 ISRVPYASAVGSLMYAMICTRPDIAHAVGAVSRFMANPGEEHWNAVKRVLRYIKGTSDVA 62
Query: 61 LCFGGDTCQVSGYVDSDYAGDLDRRRSTTGYVFKVHGAPVSWRSMLQSTVALSTTEAEYM 120
LCFGG V GYVDSDYAGDLD+R+STTGYVFK+ G VSW S LQ+ VALSTTEAEYM
Sbjct: 63 LCFGGSKFIVRGYVDSDYAGDLDKRKSTTGYVFKLAGGVVSWLSKLQTVVALSTTEAEYM 122
Query: 121 AMAEGVKEALWLWGLLDDLGIKQECVDVWCDSQSAIHLAKNQIHHARTKHIDVRYHFVRD 180
A + KEA+W+ LL++LG KQ + V+CDSQSA+H+A+N H+RTKHI V+YHFVR+
Sbjct: 123 AATQACKEAIWIQRLLEELGHKQNKITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVRE 182
Query: 181 VIEEGDVSLMKVHTDEN 197
V+E+GDV L K+ T +N
Sbjct: 183 VVEKGDVDLEKICTKDN 199
>AAK70406.1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 285 bits (728), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 136/196 (69%), Positives = 161/196 (82%), Gaps = 1/196 (0%)
Query: 4 VPYASAVGSLMYAMVCTRPDISQAVGMVSRFMANPGKTHWEAVKWVLRYLKGTVDTGLCF 63
VPYAS VGSL+YAMVCTRPDISQAV MVSR+M NPGK+ W AVKW+LRYL GTVD GL F
Sbjct: 76 VPYASVVGSLIYAMVCTRPDISQAVSMVSRYMHNPGKSQWLAVKWILRYLYGTVDVGLLF 135
Query: 64 GGDTCQ-VSGYVDSDYAGDLDRRRSTTGYVFKVHGAPVSWRSMLQSTVALSTTEAEYMAM 122
+ Q GY DSD+AGDLD++RST+GYVF + G VSWRS+LQST+ALSTTEAEY+A
Sbjct: 136 KKNCGQQCVGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYIAA 195
Query: 123 AEGVKEALWLWGLLDDLGIKQECVDVWCDSQSAIHLAKNQIHHARTKHIDVRYHFVRDVI 182
E VKEA+WL GLL DLG+ QE + V+CD+QSAI LAKNQ +HARTKHIDV+YH+VR++I
Sbjct: 196 TEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSAIFLAKNQTYHARTKHIDVKYHYVREII 255
Query: 183 EEGDVSLMKVHTDENP 198
E GDV L K+ T +NP
Sbjct: 256 EGGDVLLKKIDTKDNP 271