BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1140.1
(265 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAT57914.1 Retrovirus-related Pol polyprotein from transposon TN... 347 e-114
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN... 351 e-114
BAH90873.1 Os01g0116166 [Oryza sativa Japonica Group] 334 e-106
>JAT57914.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 529
Score = 347 bits (891), Expect = e-114, Method: Compositional matrix adjust.
Identities = 160/256 (62%), Positives = 201/256 (78%), Gaps = 1/256 (0%)
Query: 2 ILAINACFAEDRWILDTDCTFYVCPHKEWFSTYTVINGGKVLMGNDAPCKVVGIGTVQIK 61
+L++NA + D WILD+ ++++CP+K+ F TY +GG VLMGN+AP K +GIG+++IK
Sbjct: 273 VLSVNAVRSNDEWILDSGYSYHMCPYKDRFHTYEHDDGGVVLMGNNAPRKTIGIGSIRIK 332
Query: 62 MHDGVVRTITDIRHVPNLKRNLISLGTLDDNGCKYVGEGGVLRISKGSLTVMKRLKKNGL 121
M+DG+VRT+T +RHV +LK+NLISLGTL+ NGCKY EGGVLR+S+G+L +MK + N L
Sbjct: 333 MYDGIVRTLTQVRHVLDLKKNLISLGTLEANGCKYSAEGGVLRVSRGALILMKVKRTNSL 392
Query: 122 YVLQGNTVTGYVA-VSSSDKEIETTKLWHMRLGHMSERWMAILSKQSLLCGQKVGKLKFC 180
Y L G TVTG A VS S E E TKLWHMRLGHMSE+ M +LSK+ LLCGQ GK++FC
Sbjct: 393 YTLIGTTVTGAAAAVSPSMSESEVTKLWHMRLGHMSEKGMTMLSKRGLLCGQSTGKVEFC 452
Query: 181 EHCVFEKQCRVKFSTTTHNTKGNLDYIHSDLWGPSRVSSHSGGRYMLTLIDDFSRKVWVY 240
EHC+F KQ +V F TT H TK LDYIHSDLWGP+RV S G RY LT IDD+SRKVWV+
Sbjct: 453 EHCIFGKQRKVSFQTTIHRTKATLDYIHSDLWGPARVPSKGGARYFLTFIDDYSRKVWVF 512
Query: 241 ILKHKDEAFVKFKQWK 256
+LKHKDE F+KFKQWK
Sbjct: 513 MLKHKDEVFMKFKQWK 528
>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 351 bits (900), Expect = e-114, Method: Compositional matrix adjust.
Identities = 159/256 (62%), Positives = 203/256 (79%)
Query: 10 AEDRWILDTDCTFYVCPHKEWFSTYTVINGGKVLMGNDAPCKVVGIGTVQIKMHDGVVRT 69
++ WILD+ CTF++CP+K+ F+T ++ G VLMGND CK+ GIGT+QIK HDG ++T
Sbjct: 283 SKTEWILDSGCTFHMCPYKDLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKT 342
Query: 70 ITDIRHVPNLKRNLISLGTLDDNGCKYVGEGGVLRISKGSLTVMKRLKKNGLYVLQGNTV 129
++++R +P+LKRNLISLGTL+ GCKY EGGVL++SKG++ ++K + LY+LQG+ V
Sbjct: 343 LSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQGSIV 402
Query: 130 TGYVAVSSSDKEIETTKLWHMRLGHMSERWMAILSKQSLLCGQKVGKLKFCEHCVFEKQC 189
TG AVSSS + + TKLWHMRLGHMSE+ M +LSKQ LL Q +GKL+FCEHCVF KQ
Sbjct: 403 TGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLLSKQGLLGNQGIGKLEFCEHCVFGKQK 462
Query: 190 RVKFSTTTHNTKGNLDYIHSDLWGPSRVSSHSGGRYMLTLIDDFSRKVWVYILKHKDEAF 249
RV FST TH TKG LDYIHSDLWGPS+V S+ G RYM+T+IDDFSRKVWVY L+HK+E F
Sbjct: 463 RVSFSTATHRTKGTLDYIHSDLWGPSKVPSYGGCRYMMTIIDDFSRKVWVYFLRHKNETF 522
Query: 250 VKFKQWKTFIEKQTGK 265
FK+WKT +E QTGK
Sbjct: 523 PTFKKWKTLVETQTGK 538
>BAH90873.1 Os01g0116166 [Oryza sativa Japonica Group]
Length = 778
Score = 334 bits (857), Expect = e-106, Method: Compositional matrix adjust.
Identities = 154/256 (60%), Positives = 199/256 (77%), Gaps = 2/256 (0%)
Query: 12 DRWILDTDCTFYVCPHKEWFSTYTVINGGKVLMGNDAPCKVVGIGTVQIKMHDGVVRTIT 71
D+WILDT CT+++CP+++WF+TY + GG VLMG+D PC+V GIGTVQIKM DG +RT++
Sbjct: 264 DQWILDTACTYHMCPNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLS 323
Query: 72 DIRHVPNLKRNLISLGTLDDNGCKYVGEGGVLRISKGSLTVMKR-LKKNGLYVLQGNTVT 130
D+RH+PNLKR+LIS TLD G KY G G+L+++KGSL VMK +K LY L+G T+
Sbjct: 324 DVRHIPNLKRSLISFCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTIL 383
Query: 131 GYVA-VSSSDKEIETTKLWHMRLGHMSERWMAILSKQSLLCGQKVGKLKFCEHCVFEKQC 189
G VA VS S + T LWHMRLGHMSE +A LSK+ LL GQ +GKLKFCEHC+F K
Sbjct: 384 GNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLYGQSIGKLKFCEHCIFGKHK 443
Query: 190 RVKFSTTTHNTKGNLDYIHSDLWGPSRVSSHSGGRYMLTLIDDFSRKVWVYILKHKDEAF 249
RVKF+T+TH T+G LDY+HSDLWGP+R +S G RY++T++DD+SRKVW Y LKHK +AF
Sbjct: 444 RVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQAF 503
Query: 250 VKFKQWKTFIEKQTGK 265
FK+WKT +E+QT +
Sbjct: 504 DVFKEWKTMVERQTER 519