BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000066.1_g1170.1
         (107 letters)

Database: ./nr 
           95,329,361 sequences; 35,143,497,570 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP42039.1 Retrovirus-related Pol polyprotein from transposon TN...   161   2e-46
KYP53356.1 Retrovirus-related Pol polyprotein from transposon TN...   162   1e-45
KYP72919.1 Retrovirus-related Pol polyprotein from transposon TN...   160   7e-44

>KYP42039.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 394

 Score =  161 bits (408), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 70/107 (65%), Positives = 86/107 (80%)

Query: 1   MDRPGKGHWQAVKWILRYLGGTAELGLVYDRRADTSGSVVGFVDSDFSGDLDRKRSLTGY 60
           M  PGK HW AVKWI RYL GT+ +GLV+DR   T+ +V GFVDSD+ GDLDR+RSL+GY
Sbjct: 203 MHNPGKDHWSAVKWIFRYLKGTSNIGLVFDRNKATTNNVAGFVDSDYGGDLDRRRSLSGY 262

Query: 61  TFTLCGSAISWRAVLQSVVALSRTEVEYMAATEAVKEAIWLSGLVQD 107
            FTLC SAISW+A LQS+ ALS TE EY++ATE VKEA+W+ GLV++
Sbjct: 263 IFTLCNSAISWKASLQSIAALSTTEAEYVSATEGVKEALWIRGLVKE 309


>KYP53356.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 503

 Score =  162 bits (409), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 70/107 (65%), Positives = 86/107 (80%)

Query: 1   MDRPGKGHWQAVKWILRYLGGTAELGLVYDRRADTSGSVVGFVDSDFSGDLDRKRSLTGY 60
           M  PGK HW AVKWI RYL GT+ +GLV+DR   T+ +V GFVDSD+ GDLDR+RSL+GY
Sbjct: 312 MHNPGKDHWSAVKWIFRYLKGTSNIGLVFDRNKATTNNVAGFVDSDYGGDLDRRRSLSGY 371

Query: 61  TFTLCGSAISWRAVLQSVVALSRTEVEYMAATEAVKEAIWLSGLVQD 107
            FTLC SAISW+A LQS+ ALS TE EY++ATE VKEA+W+ GLV++
Sbjct: 372 IFTLCNSAISWKASLQSIAALSTTEAEYVSATEGVKEALWIRGLVKE 418


>KYP72919.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 865

 Score =  160 bits (406), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 70/107 (65%), Positives = 86/107 (80%)

Query: 1   MDRPGKGHWQAVKWILRYLGGTAELGLVYDRRADTSGSVVGFVDSDFSGDLDRKRSLTGY 60
           M  PGK HW AVKWI RYL GT+ +GLV+DR   T+ +V GFVDSD+ GDLDR+RSL+GY
Sbjct: 674 MHNPGKDHWSAVKWIFRYLKGTSNIGLVFDRNKATTNNVAGFVDSDYGGDLDRRRSLSGY 733

Query: 61  TFTLCGSAISWRAVLQSVVALSRTEVEYMAATEAVKEAIWLSGLVQD 107
            FTLC SAISW+A LQS+ ALS TE EY++ATE VKEA+W+ GLV++
Sbjct: 734 IFTLCNSAISWKASLQSIAALSTTEAEYVSATEGVKEALWIRGLVKE 780

Top