BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1180.1
(287 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_016192411.1 PREDICTED: uncharacterized protein LOC107633284 [... 222 3e-69
JAT57914.1 Retrovirus-related Pol polyprotein from transposon TN... 178 9e-49
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN... 179 3e-48
>XP_016192411.1 PREDICTED: uncharacterized protein LOC107633284 [Arachis ipaensis]
Length = 215
Score = 222 bits (566), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 144/215 (66%), Gaps = 39/215 (18%)
Query: 1 MLVGDSLSTEETRNSLLADDLRKVATSGMTS--GGVDKDQAQGLFTTRGRSNERGKGKGG 58
MLVGD+L+ +ETR SLL DDLRKVATS M+S G DQAQGLF RGR + K
Sbjct: 31 MLVGDTLTMDETRASLLVDDLRKVATSVMSSSNGREYNDQAQGLFAARGRLMKEEKI--- 87
Query: 59 KSRGSFKKTCFTCGELGHFKAACPKRKLKQKNEGYKEKQEMQEAGYVSGDPDECFSVTEV 118
+FKK Q N+ KEKQE A YVS D ++C+SVTE
Sbjct: 88 ----TFKK---------------------QNNDNPKEKQE---ASYVSNDEEDCYSVTEQ 119
Query: 119 SEKISDMWMLDSGASHHMCPNRKWFTTYRSIDGGTVIMGNDNTCKTVGLGTIRIKMHDGV 178
S +I D W+LDSGASHHMCPNRKWFTTY SI+GGTV+MGND+ CK VGLGT+RIKMHDGV
Sbjct: 120 SYEIFDKWILDSGASHHMCPNRKWFTTYESINGGTVLMGNDHACKAVGLGTVRIKMHDGV 179
Query: 179 VRP------IPDLRKNLISLSMLERNGCKIIIENG 207
VR IPDLRKNLIS+ +LE+NGCKI+ + G
Sbjct: 180 VRTLKDVRHIPDLRKNLISIGLLEKNGCKIVAKMG 214
>JAT57914.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 529
Score = 178 bits (452), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 116/276 (42%), Positives = 160/276 (57%), Gaps = 23/276 (8%)
Query: 5 DSLSTEETRNSLLADDLRKVATSGMTSGGVDKDQAQGLFTTRGRSNERG--KGKG---GK 59
DS+S E+ ++SL + +L +G +S GV ++GL RGRS ER K KG K
Sbjct: 167 DSISVEDVKSSLFSKELMDRDLTGCSSEGV----SEGL-VARGRSQERSFEKKKGERRSK 221
Query: 60 SRGSFKKTCFTCGELGHFKAACPKRKLKQKNEGYKEKQEMQEAGYVSGDPDEC--FSVTE 117
SR FK C C GH K+ C K KQK E ++A V DEC + ++
Sbjct: 222 SRNKFK-ICNYCKMKGHIKSECYGLKNKQKKEEKNP----EKAAEVGVAKDECEDYVLSV 276
Query: 118 VSEKISDMWMLDSGASHHMCPNRKWFTTYRSIDGGTVIMGNDNTCKTVGLGTIRIKMHDG 177
+ + +D W+LDSG S+HMCP + F TY DGG V+MGN+ KT+G+G+IRIKM+DG
Sbjct: 277 NAVRSNDEWILDSGYSYHMCPYKDRFHTYEHDDGGVVLMGNNAPRKTIGIGSIRIKMYDG 336
Query: 178 VVRPIP------DLRKNLISLSMLERNGCKIIIENGSIKVVKGSLVVMRGTRYGNLYSLL 231
+VR + DL+KNLISL LE NGCK E G ++V +G+L++M+ R +LY+L+
Sbjct: 337 IVRTLTQVRHVLDLKKNLISLGTLEANGCKYSAEGGVLRVSRGALILMKVKRTNSLYTLI 396
Query: 232 GTTITGDVAVGISRRDPTASTRFWHMRLGAYVRKGF 267
GTT+TG A + T+ WHMRLG KG
Sbjct: 397 GTTVTGAAAAVSPSMSESEVTKLWHMRLGHMSEKGM 432
>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 179 bits (455), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 154/276 (55%), Gaps = 23/276 (8%)
Query: 4 GDSLSTEETRNSLLADDLRKVATSGMTSGGVDKDQAQGLFTTRGRSNERGKGKGGKSRGS 63
D+LS E+ +++LL+ + + +D+ +GL + RGR+ E+G KSR
Sbjct: 169 NDTLSFEDVKSNLLSKEKFDLDIHS-------EDKGEGL-SVRGRTQEKGSTSNKKSRSK 220
Query: 64 FK-----KTCFTCGELGHFKAACPKRKLKQKNEGYKEKQEMQEAGYVSGDPDECFSVTEV 118
+ KTC C + GH + C LK+K E ++ + EA V D D ++
Sbjct: 221 SRGRKSNKTCRYCKKFGHDISDC--FILKKKQERQEKGKNPAEAANVETDSDGDVMISVS 278
Query: 119 SEKISDM-WMLDSGASHHMCPNRKWFTTYRSIDGGTVIMGNDNTCKTVGLGTIRIKMHDG 177
S+K S W+LDSG + HMCP + FTT +D G V+MGND CK G+GTI+IK HDG
Sbjct: 279 SDKRSKTEWILDSGCTFHMCPYKDLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDG 338
Query: 178 V------VRPIPDLRKNLISLSMLERNGCKIIIENGSIKVVKGSLVVMRGTRYGNLYSLL 231
VR IPDL++NLISL LE GCK E G +KV KG++V+++ R G+LY L
Sbjct: 339 TIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQ 398
Query: 232 GTTITGDVAVGISRRDPTASTRFWHMRLGAYVRKGF 267
G+ +TG AV S D A T+ WHMRLG KG
Sbjct: 399 GSIVTGSAAVSSSMSDKDA-TKLWHMRLGHMSEKGM 433