BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1190.1
(153 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cac... 140 1e-38
XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [... 145 1e-37
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN... 139 1e-35
>XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cacao] EOY09126.1
Uncharacterized protein TCM_024518 [Theobroma cacao]
Length = 277
Score = 140 bits (354), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 106/146 (72%), Gaps = 2/146 (1%)
Query: 10 SGKYEIEKFNGKNDFSYWRMQMKNLLISHKLHKTLTGKK--LGDMSNEDWEELNLEARAT 67
S KYEIEKFNG+NDFS WR++M LL+ L K L GK+ ++S+ + ++L +A +
Sbjct: 5 STKYEIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEHLPSNLSDSEKDDLMEKAHSA 64
Query: 68 IMLCLKGDVAFLVDGETTAASVWLKLESNFMTKTFTNRVYLKSKLFTCRMEEGSSIQEYV 127
I+L L +V V E +AA++W KLES ++TK+ TNR+Y+K +L+T +M EG+S+ ++
Sbjct: 65 ILLTLSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSVNTHI 124
Query: 128 NRFDRIISDLKDIDVKVEDEDQALIL 153
+ F+R+I DLK+IDVK+EDED ALIL
Sbjct: 125 DEFNRVILDLKNIDVKIEDEDLALIL 150
>XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
EOY22705.1 Transducin/WD40 repeat-like superfamily
protein [Theobroma cacao]
Length = 1029
Score = 145 bits (366), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/146 (50%), Positives = 107/146 (73%), Gaps = 2/146 (1%)
Query: 10 SGKYEIEKFNGKNDFSYWRMQMKNLLISHKLHKTLTGKK--LGDMSNEDWEELNLEARAT 67
S KYEIEKFNG+NDFS WR++M+ LL+ L K L GK+ ++S+ + ++L +A +
Sbjct: 127 STKYEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSNLSDGEKDDLMKKAHSV 186
Query: 68 IMLCLKGDVAFLVDGETTAASVWLKLESNFMTKTFTNRVYLKSKLFTCRMEEGSSIQEYV 127
I+L L +V V E +AA+VW KLES +MTK+ TNR+Y+K +L+T +M EG+S+ ++
Sbjct: 187 ILLALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLKMSEGTSVNTHI 246
Query: 128 NRFDRIISDLKDIDVKVEDEDQALIL 153
+ F+R+I DLK+IDVK+EDED ALIL
Sbjct: 247 DEFNRVILDLKNIDVKIEDEDLALIL 272
>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 139 bits (351), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 106/144 (73%), Gaps = 2/144 (1%)
Query: 12 KYEIEKFNGKNDFSYWRMQMKNLLISHKLHKTLTGK--KLGDMSNEDWEELNLEARATIM 69
K++IEKF+GK FS W++QMK +L + L K L GK K +M++E W+EL+ +A + I
Sbjct: 6 KFDIEKFDGKICFSIWKVQMKAVLTQNGLKKALDGKAKKPVNMTDEQWDELDEKALSAIQ 65
Query: 70 LCLKGDVAFLVDGETTAASVWLKLESNFMTKTFTNRVYLKSKLFTCRMEEGSSIQEYVNR 129
LCL +V V ETTAA++WLKLES +MTK+ N++ LK +L+T RM EG+ IQ ++N
Sbjct: 66 LCLSKEVLREVANETTAAALWLKLESLYMTKSLANKLRLKERLYTIRMVEGTPIQSHLNE 125
Query: 130 FDRIISDLKDIDVKVEDEDQALIL 153
F+ II DL++I++K++DED+A++L
Sbjct: 126 FNSIIMDLENIEIKIDDEDKAVLL 149