BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1230.1
(133 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013664998.1 PREDICTED: uncharacterized protein LOC106369383 [... 83 4e-16
XP_009103824.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p... 83 4e-16
XP_009111771.1 PREDICTED: putative ribonuclease H protein At1g65... 82 1e-15
>XP_013664998.1 PREDICTED: uncharacterized protein LOC106369383 [Brassica napus]
Length = 1647
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 1 MDMAKAYDRVNWTFLEKILQATGFNGILLNLIMSCVTTPSFSIKINGQVLGNFQASRGLR 60
+D+AKA+D V W FL LQA GF G + I C+T+PSFS+++NG++ G FQ+ RGLR
Sbjct: 1024 IDIAKAFDSVQWPFLLNTLQAMGFPGKFIQWISLCITSPSFSVQVNGELAGYFQSKRGLR 1083
Query: 61 QGCLLWNC 68
QGC L C
Sbjct: 1084 QGCSLSPC 1091
>XP_009103824.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103829890
[Brassica rapa]
Length = 1659
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 1 MDMAKAYDRVNWTFLEKILQATGFNGILLNLIMSCVTTPSFSIKINGQVLGNFQASRGLR 60
+D+AKA+D V W FL LQA GF G + I C+T+PSFS+++NG++ G FQ+ RGLR
Sbjct: 1004 IDIAKAFDSVQWPFLLNTLQAMGFPGKFIQWISLCITSPSFSVQVNGELAGYFQSKRGLR 1063
Query: 61 QGCLLWNC 68
QGC L C
Sbjct: 1064 QGCSLSPC 1071
>XP_009111771.1 PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 668
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 1 MDMAKAYDRVNWTFLEKILQATGFNGILLNLIMSCVTTPSFSIKINGQVLGNFQASRGLR 60
+D+AKA+D V W FL LQA GF G + I C+T+PSFS+++NG++ G FQ+ RGLR
Sbjct: 45 IDIAKAFDSVQWPFLLNTLQAMGFPGKFIQWISLCITSPSFSVQVNGELAGYFQSKRGLR 104
Query: 61 QGCLLWNC 68
QGC L C
Sbjct: 105 QGCSLSPC 112