BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1400.1
(201 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP78965.1 Retrovirus-related Pol polyprotein from transposon 17... 280 8e-92
KYP37958.1 Retrovirus-related Pol polyprotein from transposon 17... 283 2e-91
KYP35208.1 Retrovirus-related Pol polyprotein from transposon 17... 278 2e-91
>KYP78965.1 Retrovirus-related Pol polyprotein from transposon 17.6, partial
[Cajanus cajan]
Length = 335
Score = 280 bits (716), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 162/201 (80%)
Query: 1 MPFWLTNAPTVFMQLMNGIFKPYLDQFVVVFIDDILVYSKSKKDHEGHLRVVLQILRDQQ 60
MPF +TNAP VFM MNGIF+P LD+FVVVFIDD LVYS+S +DH HLR VL++LR++Q
Sbjct: 26 MPFGVTNAPAVFMDYMNGIFRPVLDRFVVVFIDDFLVYSRSLEDHREHLRSVLEVLRERQ 85
Query: 61 LYAKYTKCEFWLAEVKFLGHVVNREGISVDPDKVRAVLEWPKPKTQTEIRSFLGLAGYYR 120
LY K +KCEFWL+EVKFLGHV++ +GI+VDP KV V++W +P T TEIRSFLGLAGYYR
Sbjct: 86 LYDKLSKCEFWLSEVKFLGHVISAKGIAVDPAKVEVVIQWERPMTATEIRSFLGLAGYYR 145
Query: 121 RFIEEFSKIARPLTQLTRKYVKVDLTEECDEAFQDLKNKLTLAPVLILPKLRESYTLYTD 180
RFIE FS+I PLTQLTRK T+ C+++FQ+LK +LT +PVL+LP E + ++ D
Sbjct: 146 RFIEGFSRIVMPLTQLTRKDQPFVWTDACEQSFQELKRRLTTSPVLVLPNTGEHFDVFCD 205
Query: 181 ASYKGLGCVLMQNGQVVAYGS 201
AS++GLGCVLMQ G+VVAY S
Sbjct: 206 ASHQGLGCVLMQGGRVVAYAS 226
>KYP37958.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
cajan]
Length = 437
Score = 283 bits (723), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 134/201 (66%), Positives = 161/201 (80%)
Query: 1 MPFWLTNAPTVFMQLMNGIFKPYLDQFVVVFIDDILVYSKSKKDHEGHLRVVLQILRDQQ 60
MPF +TNAP VFM MN IF PYLD FVVVFIDDIL+YS++ ++HE HL+ VLQIL+D+Q
Sbjct: 1 MPFGVTNAPAVFMDYMNRIFHPYLDHFVVVFIDDILIYSRTHEEHEEHLQTVLQILKDKQ 60
Query: 61 LYAKYTKCEFWLAEVKFLGHVVNREGISVDPDKVRAVLEWPKPKTQTEIRSFLGLAGYYR 120
LYAK +KCEFWL EVKFLGHV++++G+SVDP KV AVL W PKT TEIRSFLGLAGYYR
Sbjct: 61 LYAKLSKCEFWLEEVKFLGHVISKDGVSVDPSKVEAVLLWEPPKTVTEIRSFLGLAGYYR 120
Query: 121 RFIEEFSKIARPLTQLTRKYVKVDLTEECDEAFQDLKNKLTLAPVLILPKLRESYTLYTD 180
RFIE FSKIA PLTQLT+K + TE+C+ +FQ+LK +LT APVL LP + ++ D
Sbjct: 121 RFIEGFSKIAMPLTQLTKKGQPFEWTEKCENSFQELKKRLTTAPVLALPNPNGQFVIFCD 180
Query: 181 ASYKGLGCVLMQNGQVVAYGS 201
AS GLGCVLMQ+ +VVAY S
Sbjct: 181 ASKMGLGCVLMQDRRVVAYAS 201
>KYP35208.1 Retrovirus-related Pol polyprotein from transposon 17.6, partial
[Cajanus cajan]
Length = 300
Score = 278 bits (710), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 133/201 (66%), Positives = 158/201 (78%)
Query: 1 MPFWLTNAPTVFMQLMNGIFKPYLDQFVVVFIDDILVYSKSKKDHEGHLRVVLQILRDQQ 60
MP +TNAP VFM MN IF+PYLD FVVVFIDDIL+YS+ ++HE HLR VLQIL+D+Q
Sbjct: 83 MPLGVTNAPAVFMDYMNRIFRPYLDHFVVVFIDDILIYSRIHEEHEKHLRTVLQILKDKQ 142
Query: 61 LYAKYTKCEFWLAEVKFLGHVVNREGISVDPDKVRAVLEWPKPKTQTEIRSFLGLAGYYR 120
LYAK +KCEFWL EVKFLGHV+ ++G+S+DP KV A L W PKT TEIRSFLGLAGYYR
Sbjct: 143 LYAKLSKCEFWLEEVKFLGHVIFKDGVSIDPSKVEADLLWEPPKTVTEIRSFLGLAGYYR 202
Query: 121 RFIEEFSKIARPLTQLTRKYVKVDLTEECDEAFQDLKNKLTLAPVLILPKLRESYTLYTD 180
RFIE FSKIA PLTQLT+K + TEEC+ +FQ+LK +LT APVL LP + ++ D
Sbjct: 203 RFIEGFSKIAMPLTQLTKKGQSFEWTEECENSFQELKKRLTTAPVLALPNPNGQFVIFCD 262
Query: 181 ASYKGLGCVLMQNGQVVAYGS 201
AS GLGCVLMQ+ +VVAY S
Sbjct: 263 ASKMGLGCVLMQDIRVVAYAS 283