BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1410.1
(150 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017228358.1 PREDICTED: uncharacterized protein LOC108203739 [... 130 2e-32
XP_017228370.1 PREDICTED: uncharacterized protein LOC108203750, ... 128 9e-32
XP_007022772.1 Retrotransposon protein, putative [Theobroma caca... 119 1e-30
>XP_017228358.1 PREDICTED: uncharacterized protein LOC108203739 [Daucus carota
subsp. sativus]
Length = 712
Score = 130 bits (326), Expect = 2e-32, Method: Composition-based stats.
Identities = 65/146 (44%), Positives = 98/146 (67%), Gaps = 10/146 (6%)
Query: 3 CRDKIVTLKLRDGSTVKFRGVRNRICQYGLETTHKNRV------KTLSYVQTVEESPKLP 56
C++K+V L G V F+G R Q L + ++ L+YV +++S ++
Sbjct: 530 CKNKMVVLSSPQGKKVTFKGQRQ--TQRFLTSMQAKKMIRKGCEAYLAYV--IDKSKEVS 585
Query: 57 PPETVPIVSEFLDIFPEELLGIPPQRAVDFTIDLVPGTAPISIALYRMAPTELRELKKQI 116
PE +P+V +F+D+FPEEL G+PP R ++FTI+L PGT P+S A YRMAP+E++EL KQI
Sbjct: 586 SPEDIPVVRDFIDVFPEELPGLPPDRQIEFTIELAPGTEPVSKAPYRMAPSEMKELAKQI 645
Query: 117 QEMLDRGFIRPSISPKGSTSIICEEK 142
QE+LD+GFIRPS+SP G+ + ++K
Sbjct: 646 QELLDKGFIRPSVSPWGAPVLFVKKK 671
>XP_017228370.1 PREDICTED: uncharacterized protein LOC108203750, partial [Daucus
carota subsp. sativus]
Length = 808
Score = 128 bits (322), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 97/146 (66%), Gaps = 10/146 (6%)
Query: 3 CRDKIVTLKLRDGSTVKFRGVRNRICQYGLETTHKNRV------KTLSYVQTVEESPKLP 56
C++K V L G V F+G R Q L + ++ L+YV +++S ++
Sbjct: 593 CKNKRVVLSSPQGKKVTFKGQRQ--TQRFLTSMQAKKMIRKGCEAYLAYV--IDKSKEVS 648
Query: 57 PPETVPIVSEFLDIFPEELLGIPPQRAVDFTIDLVPGTAPISIALYRMAPTELRELKKQI 116
PE +P+V +F+D+FPEEL G+PP R ++FTI+L PGT P+S A YRMAP+E++EL KQI
Sbjct: 649 SPEDIPVVRDFIDVFPEELHGLPPDRQIEFTIELAPGTEPVSKAPYRMAPSEMKELAKQI 708
Query: 117 QEMLDRGFIRPSISPKGSTSIICEEK 142
QE+LD+GFIRPS+SP G+ + ++K
Sbjct: 709 QELLDKGFIRPSVSPWGAPVLFVKKK 734
>XP_007022772.1 Retrotransposon protein, putative [Theobroma cacao] EOY14297.1
Retrotransposon protein, putative [Theobroma cacao]
Length = 254
Score = 119 bits (298), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 93/147 (63%), Gaps = 10/147 (6%)
Query: 3 CRDKIVTLKLRDGSTVKFRGVRNRICQYGLETTHKNRVKTLSY-------VQTVEESPKL 55
C K V L+ +G+ + F G R + + +++ Y + T + PKL
Sbjct: 13 CFRKEVVLRNSEGAEIVFVGERRVLPSCVISAIKASKLVQKGYPTYLAYVIDTSKGEPKL 72
Query: 56 PPPETVPIVSEFLDIFPEELLGIPPQRAVDFTIDLVPGTAPISIALYRMAPTELRELKKQ 115
E VPIVSEF D+FP++L GIPP R ++F IDL+PGTAPISI YRMAP EL+ELK Q
Sbjct: 73 ---EDVPIVSEFPDVFPDDLPGIPPNRELEFPIDLLPGTAPISIPPYRMAPAELKELKAQ 129
Query: 116 IQEMLDRGFIRPSISPKGSTSIICEEK 142
+Q+++D+GFIRPSISP G+ + ++K
Sbjct: 130 LQDLVDKGFIRPSISPWGAPVLFVKKK 156