BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1840.1
(93 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_016647234.1 PREDICTED: retrovirus-related Pol polyprotein fro... 110 4e-27
CAN77158.1 hypothetical protein VITISV_019025 [Vitis vinifera] 105 9e-25
BAT97420.1 hypothetical protein VIGAN_09086300 [Vigna angularis ... 103 2e-24
>XP_016647234.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Prunus mume]
Length = 394
Score = 110 bits (276), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 71/90 (78%)
Query: 1 MKLVLDDELQALLLLNFLPDSWETLVVSLSNSAPDGIMRMNHVTGNLLNEETRRKSSLDE 60
MK+VLDDELQAL+LL+ LPDSW+TLVVSLSNSAP G++ ++ V ++ NEE RRK
Sbjct: 192 MKMVLDDELQALVLLSSLPDSWDTLVVSLSNSAPQGVLTLDIVKDSMFNEEARRKEQGVV 251
Query: 61 SHSEALVTERRGRGKSRKPHNRDKSRGRSK 90
+ SEALV+E RGR +RK H +DKS+GRS+
Sbjct: 252 AESEALVSEYRGRTNNRKFHRQDKSKGRSR 281
>CAN77158.1 hypothetical protein VITISV_019025 [Vitis vinifera]
Length = 788
Score = 105 bits (263), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 75/96 (78%), Gaps = 3/96 (3%)
Query: 1 MKLVLDDELQALLLLNFLPDSWETLVVSLSNSAPDGIMRMNHVTGNLLNEETRRKSSLDE 60
MKL LDDE+Q LLLL+ LP+SWETLVVSLSNS P+G++ +N V N+ NEE +RK
Sbjct: 1 MKLELDDEVQVLLLLSSLPNSWETLVVSLSNSTPNGVITINMVKDNMFNEEAKRKKLGIS 60
Query: 61 SHSEALVTERRGRGKSRKP---HNRDKSRGRSKPKK 93
S++EALVTERRGR KSRKP +N DKSRG+SK +K
Sbjct: 61 SNTEALVTERRGRSKSRKPSSDYNCDKSRGKSKSQK 96
>BAT97420.1 hypothetical protein VIGAN_09086300 [Vigna angularis var.
angularis]
Length = 378
Score = 103 bits (257), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 69/88 (78%)
Query: 5 LDDELQALLLLNFLPDSWETLVVSLSNSAPDGIMRMNHVTGNLLNEETRRKSSLDESHSE 64
+DDELQALLL++ LP+SW+TLVV+LSNSAPDG + ++++T +LLNEE+RRK SHSE
Sbjct: 134 IDDELQALLLISSLPESWDTLVVTLSNSAPDGKLSLDNITDSLLNEESRRKERGSSSHSE 193
Query: 65 ALVTERRGRGKSRKPHNRDKSRGRSKPK 92
A V E RGR ++R R+KSRGR K +
Sbjct: 194 ANVVENRGRSENRSKGKREKSRGRFKSR 221