BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1960.1
(458 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP34377.1 Retrovirus-related Pol polyprotein from transposon TN... 428 e-138
KYP38661.1 Retrovirus-related Pol polyprotein from transposon TN... 414 e-134
GAU16220.1 hypothetical protein TSUD_298520 [Trifolium subterran... 404 e-130
>KYP34377.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 938
Score = 428 bits (1100), Expect = e-138, Method: Compositional matrix adjust.
Identities = 227/385 (58%), Positives = 270/385 (70%), Gaps = 16/385 (4%)
Query: 64 SSPVVPSAILADSDGSSADTASPVSP-------SLSSDSIGTSANSPHHASKPIDNSSAI 116
SSP P I ++ ++ D PV+ SL+++ + S + S P D++S
Sbjct: 486 SSPSFPDEICINTPINADDLLDPVTIVQIRPDISLANNQVANSDETTISTSNPQDDNSTN 545
Query: 117 PISDHSLVNPDSIPVTE-GLDITRPS-RIRRPPSHLDDYICVTPTFPFSDSNSDIPYPLS 174
S + IP E L T S R RRPP HL DY+C + S +PL+
Sbjct: 546 SQSLSEDAPSNDIPSVETSLPPTNHSQRPRRPPHHLKDYVC-------NHIKSTTNFPLA 598
Query: 175 HSLSDKFLSSDHKIFLASVLSENEPSSFSQAMKFPHWKEAMTKEIQALESNNTWSLVPLP 234
+ LS LS+ H+ FL +++ EP SFSQAMK W+EAM KEIQALESNNTWSL PLP
Sbjct: 599 NYLSLSNLSNFHQPFLTNIIGNQEPKSFSQAMKSAEWREAMAKEIQALESNNTWSLCPLP 658
Query: 235 MNKRPIGCKWVYKIKFKPDGSIERYKARLVAKGYTQIEGLDYHDTFASVAKFVTVRVLLS 294
K IGCKWVYKIK++ DGSIERYKA LVAKGYTQIEG+DYHDTFA VAK VTVR+LLS
Sbjct: 659 QGKSSIGCKWVYKIKYRSDGSIERYKACLVAKGYTQIEGIDYHDTFAPVAKLVTVRLLLS 718
Query: 295 IAAIKNWSLHQLDVNNAFLQGDLNEEVYMKLPPGYSNKGETRVCRLHKSIYGLKQASRQW 354
IAAIKNWSLHQLDVNNAFLQGDLNEEVYMKLPPG+S KGET VC+LHKSIYGLKQASRQW
Sbjct: 719 IAAIKNWSLHQLDVNNAFLQGDLNEEVYMKLPPGFSRKGETYVCKLHKSIYGLKQASRQW 778
Query: 355 FSKFSSVLIQKGFKQSLSDYSLFSYIKADIIIHVLVYVDDIIITGNNESAISKLKSFLGD 414
FSKFS+ LIQ+GF+QS+SDYSLF+YI + VLVY+DDIIITGNN+ AI +K FL
Sbjct: 779 FSKFSTTLIQRGFRQSISDYSLFTYISGQTSVFVLVYIDDIIITGNNDDAIFNIKQFLAQ 838
Query: 415 TFSLKNLGFLKYFLGIETYALKDEI 439
+FS+K+LG L+YFL IE K I
Sbjct: 839 SFSIKDLGNLRYFLAIEVSRSKKGI 863
>KYP38661.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 778
Score = 414 bits (1063), Expect = e-134, Method: Compositional matrix adjust.
Identities = 220/385 (57%), Positives = 266/385 (69%), Gaps = 16/385 (4%)
Query: 64 SSPVVPSAILADSDGSSADTASPVSP-------SLSSDSIGTSANSPHHASKPIDNSSAI 116
SSP P I ++ ++ D P++ SL+++ + S + S P D++S
Sbjct: 200 SSPSFPDEICINTPINADDLLDPITIVQIRPDISLANNQVENSDETTISTSNPQDDNSTN 259
Query: 117 PISDHSLVNPDSIPVTE-GLDITRPSRI-RRPPSHLDDYICVTPTFPFSDSNSDIPYPLS 174
S + + I TE L T S+ RRPP HL DY+C + S +PL+
Sbjct: 260 SQSLSEDASSNDISSTETSLPPTNHSQHPRRPPHHLKDYVC-------NHIKSITNFPLA 312
Query: 175 HSLSDKFLSSDHKIFLASVLSENEPSSFSQAMKFPHWKEAMTKEIQALESNNTWSLVPLP 234
+ LS LS+ H+ FL +++ EP SFSQAMK W+EAM KEIQALESNNTWSL PLP
Sbjct: 313 NYLSLSNLSNSHQAFLTNIIDNQEPKSFSQAMKSAEWREAMAKEIQALESNNTWSLCPLP 372
Query: 235 MNKRPIGCKWVYKIKFKPDGSIERYKARLVAKGYTQIEGLDYHDTFASVAKFVTVRVLLS 294
K IGCKWVYKIK++ DGSIERYKARLVAKGY QIEG+DYHDTFA VAK V VR+LLS
Sbjct: 373 QGKSSIGCKWVYKIKYRSDGSIERYKARLVAKGYAQIEGIDYHDTFAPVAKLVIVRLLLS 432
Query: 295 IAAIKNWSLHQLDVNNAFLQGDLNEEVYMKLPPGYSNKGETRVCRLHKSIYGLKQASRQW 354
IAAIKNWSLHQLDVNN FLQGDLNEEVYMKLPP +S KGET VC+LHK IYGLKQASRQW
Sbjct: 433 IAAIKNWSLHQLDVNNDFLQGDLNEEVYMKLPPRFSRKGETYVCKLHKFIYGLKQASRQW 492
Query: 355 FSKFSSVLIQKGFKQSLSDYSLFSYIKADIIIHVLVYVDDIIITGNNESAISKLKSFLGD 414
FSKFS+ +IQ+GF+QS+SDYSLF+YI + VLVYVDDIIIT NN+ AI +K FL
Sbjct: 493 FSKFSTTIIQRGFRQSISDYSLFTYISGQTSVFVLVYVDDIIITSNNDDAIFNIKQFLAQ 552
Query: 415 TFSLKNLGFLKYFLGIETYALKDEI 439
+FS+K+ G L+YFLGIE K I
Sbjct: 553 SFSIKDHGNLRYFLGIEVSRSKKGI 577
>GAU16220.1 hypothetical protein TSUD_298520 [Trifolium subterraneum]
Length = 801
Score = 404 bits (1038), Expect = e-130, Method: Compositional matrix adjust.
Identities = 199/304 (65%), Positives = 230/304 (75%), Gaps = 5/304 (1%)
Query: 136 DITRPSRIRRPPSHLDDYICVTPTFPFSDSNSDIPYPLSHSLSDKFLSSDHKIFLASVLS 195
D P RIR P L DY+ + S I +PL + S LSS H+ FL +++
Sbjct: 331 DRRYPQRIRTPSIRLTDYVN-----QINHVTSKINFPLENYFSLSNLSSSHRAFLINIID 385
Query: 196 ENEPSSFSQAMKFPHWKEAMTKEIQALESNNTWSLVPLPMNKRPIGCKWVYKIKFKPDGS 255
EP S+SQ ++ W+EAM KEIQALESNNTW L PLP K IGCKWVYKIK+ DG+
Sbjct: 386 NKEPKSYSQVIQSTEWREAMAKEIQALESNNTWVLCPLPEGKSAIGCKWVYKIKYHSDGT 445
Query: 256 IERYKARLVAKGYTQIEGLDYHDTFASVAKFVTVRVLLSIAAIKNWSLHQLDVNNAFLQG 315
IERYKARLVAKGYTQ++G+DYHDTFA VAK VTVR LLSIAAIKNWSLHQLDVNNAFLQG
Sbjct: 446 IERYKARLVAKGYTQVQGIDYHDTFAPVAKLVTVRRLLSIAAIKNWSLHQLDVNNAFLQG 505
Query: 316 DLNEEVYMKLPPGYSNKGETRVCRLHKSIYGLKQASRQWFSKFSSVLIQKGFKQSLSDYS 375
DL EEVYMKLPPG+S+KG+ VC+L+KSIYGLKQASRQWFSKFS+ LIQKGF+QS+SDYS
Sbjct: 506 DLGEEVYMKLPPGFSHKGKPCVCKLNKSIYGLKQASRQWFSKFSTTLIQKGFRQSISDYS 565
Query: 376 LFSYIKADIIIHVLVYVDDIIITGNNESAISKLKSFLGDTFSLKNLGFLKYFLGIETYAL 435
LF+YI I VLVYVDDIIITGNNE AI +K FL +FS+K+LG L+YFLGIE
Sbjct: 566 LFTYICDQTTIFVLVYVDDIIITGNNEDAILDIKQFLAQSFSIKDLGHLRYFLGIEVSRS 625
Query: 436 KDEI 439
K I
Sbjct: 626 KKGI 629