BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1970.1
(666 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABD63131.1 Retrotransposon gag protein [Asparagus officinalis] 207 1e-57
ABD63157.1 Retrotransposon gag protein [Asparagus officinalis] 201 5e-56
XP_010659800.1 PREDICTED: uncharacterized protein LOC100854181 [... 211 1e-54
>ABD63131.1 Retrotransposon gag protein [Asparagus officinalis]
Length = 321
Score = 207 bits (526), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 135/209 (64%), Gaps = 3/209 (1%)
Query: 12 NQPMTLKDYMHPTMVCQPSCIRLPSTN-TYFQIKSGIINMLPVFRGLENENPYYHVREFE 70
NQP+ L+D +PT PSCIRLP N F+++ INMLP F G E E+ Y + EFE
Sbjct: 3 NQPV-LQDMCYPTRNAIPSCIRLPEVNGANFELRPHFINMLPKFLGNETEDAYIFISEFE 61
Query: 71 DVCKTMNVPN-SIDAVTLRLFPFSLKDKAKSWFYALKPESISTWAELSGVFLQKFFSTHK 129
+VC + + + DA+ LR PF+LKDKAK W Y+L SISTW E VFL+KFF HK
Sbjct: 62 EVCIMIKMRELTEDAIKLRFIPFALKDKAKKWLYSLPTNSISTWEEFVTVFLKKFFPIHK 121
Query: 130 TRALRLSLLNFEQLEGESLHTYLERFKDVLLECPHHGFGKMKLVQILYEGLDYPTISLVE 189
T LR S+ NF+ + GE Y +RFKD+L++CPHHG K +L Q++YEGLDY + + +E
Sbjct: 122 TVKLRNSIQNFKIVPGEPFWKYFDRFKDLLIQCPHHGLEKWRLCQVIYEGLDYSSKTSLE 181
Query: 190 SFCNGGFSNKTADEGMAFLEELAVQSHQW 218
S C G F K ADE FLE L+ ++ QW
Sbjct: 182 SMCQGDFMRKNADEAWEFLESLSEKTMQW 210
>ABD63157.1 Retrotransposon gag protein [Asparagus officinalis]
Length = 279
Score = 201 bits (510), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 132/214 (61%), Gaps = 2/214 (0%)
Query: 14 PMTLKDYMHPTMVCQPSCIRLPSTNTY-FQIKSGIINMLPVFRGLENENPYYHVREFEDV 72
P L D +P PSCIRLP TN F+++ INMLP F G + E+ Y + EFE+V
Sbjct: 6 PPVLHDMCYPIRNAIPSCIRLPETNGISFELRPQYINMLPKFLGNKTEDAYIFISEFEEV 65
Query: 73 CKTMNVPN-SIDAVTLRLFPFSLKDKAKSWFYALKPESISTWAELSGVFLQKFFSTHKTR 131
C + + + DAV LR PF+LKDKAK W Y+L SISTW E VFL+K F HKT
Sbjct: 66 CIMIKMRELNEDAVKLRFIPFALKDKAKKWLYSLPTNSISTWDEFVTVFLKKIFPIHKTV 125
Query: 132 ALRLSLLNFEQLEGESLHTYLERFKDVLLECPHHGFGKMKLVQILYEGLDYPTISLVESF 191
LR S+ NF+ + GE Y +RFKD+L++CPHHG K +L QI+YEGLDY + +ES
Sbjct: 126 KLRNSIQNFKIIPGEPFWKYFDRFKDLLIQCPHHGLEKWRLCQIIYEGLDYSAKTSLESM 185
Query: 192 CNGGFSNKTADEGMAFLEELAVQSHQWGTSRELV 225
C+G F K ADE FLE L+ + QW ++V
Sbjct: 186 CHGDFMRKNADEAWEFLESLSEKIMQWEHCDDMV 219
>XP_010659800.1 PREDICTED: uncharacterized protein LOC100854181 [Vitis vinifera]
Length = 967
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/448 (32%), Positives = 223/448 (49%), Gaps = 62/448 (13%)
Query: 16 TLKDYMHPTMVCQPSCIRLPSTNTYFQIKSGIINMLPVFRGLENENPYYHVREFEDVCKT 75
T+++ ++P + PSC LP + + I+ +++ LP+F+G ENENPY H++EFED+
Sbjct: 23 TMRELLNPPRLSTPSCFMLPPNHDHVTIRPQVVSQLPIFKGTENENPYSHIKEFEDIVSI 82
Query: 76 MNVPNS-IDAVTLRLFPFSLKDKAKSWFYALKPESISTWAELSGVFLQKFFSTHKTRALR 134
N+ ++ ++LFP SLKDKAK+W +L+P SI W +L VFLQKFF TH+T AL+
Sbjct: 83 FREANTPLEIFRMKLFPLSLKDKAKTWLNSLRPYSIRNWGDLQSVFLQKFFPTHRTSALK 142
Query: 135 LSLLNFEQLEGESLHTYLERFKDVLLECPHHGFGKMKLVQILYE--GLDY-PTISLVESF 191
+ NF+ +E E ERF++++ CPHHGF LV YE G+ PT+ V+
Sbjct: 143 KEISNFKAMEDEKFFACWERFREIVAACPHHGFDNWMLVSYFYEEHGVQSCPTLPAVQDM 202
Query: 192 CNGGFSNKTADEGMAFLEEL-AVQSHQWGTSRELVCNTYNPSWRNHPNLSW---SKGQYQ 247
F E+ A+ +++ +S NTYNPSWRNHPNLSW + GQ+Q
Sbjct: 203 ---------------FTEQANALGTYKQYSSNSPYSNTYNPSWRNHPNLSWRGGNNGQFQ 247
Query: 248 SQPST-----SMNHPEFGASSDPYAQSSVQH-SSEKKLTLEDTMNTPEFMQA-------- 293
Q + + F P QH +S +LED M EF+Q
Sbjct: 248 QQGNRFQGNQTNGQQGFQPQGMPSQNFQQQHQASLSNSSLEDMMR--EFIQKQDKRNEDQ 305
Query: 294 ------TTQTLVSLKNQVCQLQEAFSQIEIGEVLSQPGQGSECT--LARQPPDQANVVTT 345
T+Q LV ++ + QL + S E G+ +QP + ++ + N V T
Sbjct: 306 NRINAQTSQELVDIRTTLSQLAVSLSH-EKGKFPAQPQKNPRGVNEVSEVQKEDCNAVIT 364
Query: 346 LRRGRVLDK-SVRVHEDNKSHPRDNP--EKARESESPPPTFEPYV---------PRAPYP 393
LR G+ + + V ED + RD P EK +E +E + P+P
Sbjct: 365 LRNGKEYEGPKLPVSEDIPA--RDEPAVEKNVRNEKASEKYEEVIVSKNKMSVSNHLPFP 422
Query: 394 QRLMETMKLPQSDEVVKLFKHVNINVPL 421
+ ++ E++++ K V IN+PL
Sbjct: 423 SAMQRHKVGDKTLEILEVLKQVKINIPL 450