BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g2000.1
(123 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013589266.1 PREDICTED: uncharacterized protein LOC106297605 [... 188 2e-53
BAA11674.1 unnamed protein product [Nicotiana tabacum] 187 1e-52
XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein fro... 176 1e-48
>XP_013589266.1 PREDICTED: uncharacterized protein LOC106297605 [Brassica oleracea
var. oleracea]
Length = 841
Score = 188 bits (477), Expect = 2e-53, Method: Composition-based stats.
Identities = 88/122 (72%), Positives = 104/122 (85%)
Query: 1 MGEHGYNKTTSYHCVFVRRFGEDDFIILLLYVDNMLIVGRNSGRIQELKKQLNKFFSMKD 60
MGEHGY +T S HCVFV+ FGEDDFIILLLYVD+MLIVGRN RI+ELK+QL++ F+MKD
Sbjct: 691 MGEHGYTETDSDHCVFVKVFGEDDFIILLLYVDDMLIVGRNMDRIKELKEQLSESFAMKD 750
Query: 61 LSPAKQILGIRIVRDRENRLIHLSHEKYIEKILQRFCMDRSKAVSTPLAGHFRLSSQHSL 120
+ PAKQILG+RIVR+R +LIHLS EKYIEK+L+RF MD+SK +STPLA H RLSSQ S
Sbjct: 751 MGPAKQILGMRIVRERGEKLIHLSQEKYIEKVLKRFHMDKSKVLSTPLAPHLRLSSQQSP 810
Query: 121 ST 122
T
Sbjct: 811 KT 812
>BAA11674.1 unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 187 bits (474), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 87/123 (70%), Positives = 105/123 (85%)
Query: 1 MGEHGYNKTTSYHCVFVRRFGEDDFIILLLYVDNMLIVGRNSGRIQELKKQLNKFFSMKD 60
MG+HGY KTTS HCVF ++F +DDFIILLLYVD+MLIVGRN RI LK+QL+KFF+MKD
Sbjct: 979 MGQHGYKKTTSDHCVFAQKFSDDDFIILLLYVDDMLIVGRNVSRINSLKEQLSKFFAMKD 1038
Query: 61 LSPAKQILGIRIVRDRENRLIHLSHEKYIEKILQRFCMDRSKAVSTPLAGHFRLSSQHSL 120
L PAKQILG+RI+RDRE + + LS EKYIEK+LQRF M+++KAVS PLA HFRLS++ S
Sbjct: 1039 LGPAKQILGMRIMRDREAKKLWLSQEKYIEKVLQRFNMEKTKAVSCPLANHFRLSTKQSP 1098
Query: 121 STD 123
STD
Sbjct: 1099 STD 1101
>XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Gossypium arboreum]
Length = 1184
Score = 176 bits (445), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 81/123 (65%), Positives = 104/123 (84%)
Query: 1 MGEHGYNKTTSYHCVFVRRFGEDDFIILLLYVDNMLIVGRNSGRIQELKKQLNKFFSMKD 60
MGE Y KTTS HCVFV++F DDFIILLLYVD+MLIVG+N+ RI++LK++L+K F+MKD
Sbjct: 832 MGEQSYKKTTSDHCVFVKKFSGDDFIILLLYVDDMLIVGQNASRIEKLKQELSKSFAMKD 891
Query: 61 LSPAKQILGIRIVRDRENRLIHLSHEKYIEKILQRFCMDRSKAVSTPLAGHFRLSSQHSL 120
L PAKQILGIR+ RDR+ + + LS E+YIEK+LQ+F MD++KAV+TP A HFRLS +HS
Sbjct: 892 LGPAKQILGIRLTRDRKAKKLWLSQERYIEKVLQKFSMDKAKAVNTPFAMHFRLSVKHSP 951
Query: 121 STD 123
ST+
Sbjct: 952 STE 954