BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g2080.1
(346 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP53356.1 Retrovirus-related Pol polyprotein from transposon TN... 450 e-154
KYP47640.1 Retrovirus-related Pol polyprotein from transposon TN... 466 e-153
KYP48513.1 Retrovirus-related Pol polyprotein from transposon TN... 449 e-147
>KYP53356.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 503
Score = 450 bits (1157), Expect = e-154, Method: Compositional matrix adjust.
Identities = 213/338 (63%), Positives = 261/338 (77%)
Query: 1 MQEEMESLHKNETWEVVPLPEGKSVIGCKWVYKKKEDSSEIKGTRYKAKLVAKGYAQKEG 60
M EE+ESLHKN TW + LP+GK + CKW+YKKK+ ++ R KA+LV KG+ QKEG
Sbjct: 1 MNEEIESLHKNNTWNLTKLPKGKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGFYQKEG 60
Query: 61 VDYNEIFSPIVKHTYIRVLLSIVAHGDLELEQLDVKTAFLHGDLEEEIYMAQPEGYKVEG 120
+D+NEIFSP+V+HT IR+LL+ VA DLELEQLDVKTAFLHG+LEEEIYM QPEG+ V
Sbjct: 61 IDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPS 120
Query: 121 KENQVCRLRKSLYRLKQSPRQWYKRFDFFMLKHGFRRSKYDCCVYIKKLREGDFIYLLLY 180
KE+ VC+L+KSLY LKQ+PRQWYK+FD FM+ G+ RSKYD C+Y ++ +G FIYLLLY
Sbjct: 121 KEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLY 180
Query: 181 VADMFITSRSMVEIDRLKSQLSQEFEMKGMGAAKKILGMEIKRERSIKKLYSSQKGYIER 240
V DM I SR I +LK+QL+ EFEMK +GAAKKILGMEI R+R + KL+ SQ+ YIER
Sbjct: 181 VDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIER 240
Query: 241 VVSRFGMQNAKVVSTPLAPHFRLSERQSSTTTVEKDHMDCVPYASAVGSLMYAMVCTRPD 300
++ RF M N K VSTPLA HF+LS T E + M VPYASAVGSLMYAMVCTRPD
Sbjct: 241 LLDRFNMNNCKPVSTPLAAHFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYAMVCTRPD 300
Query: 301 ISQAVSVVSRFMENLGKTHWEAVKWVLRYLKGTVDMCL 338
++ AVS+VSR+M N GK HW AVKW+ RYLKGT ++ L
Sbjct: 301 LAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIGL 338
>KYP47640.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1032
Score = 466 bits (1198), Expect = e-153, Method: Compositional matrix adjust.
Identities = 224/341 (65%), Positives = 271/341 (79%), Gaps = 1/341 (0%)
Query: 1 MQEEMESLHKNETWEVVPLPEGKSVIGCKWVYKKKEDSSEIKGTRYKAKLVAKGYAQKEG 60
M EEMESL +N+TW++ LP+GK IGCKWVY KK+ S+ RYKA+LVAKGYAQKEG
Sbjct: 598 MSEEMESLRRNQTWKLANLPKGKKAIGCKWVYAKKDGFSDKSEVRYKARLVAKGYAQKEG 657
Query: 61 VDYNEIFSPIVKHTYIRVLLSIVAHGDLELEQLDVKTAFLHGDLEEEIYMAQPEGYKVEG 120
+DYNE+FSP+VKH+ IRVLL++VA D+EL Q+DVKTAFLHGDLEEEIYM QPEG+KV G
Sbjct: 658 IDYNEVFSPVVKHSSIRVLLALVAQLDMELVQMDVKTAFLHGDLEEEIYMTQPEGFKVAG 717
Query: 121 KENQVCRLRKSLYRLKQSPRQWYKRFDFFMLKHGFRRSKYDCCVYIKKLREGDFIYLLLY 180
KEN C+L KSLY LKQSPRQWYKRFD FML+ + RSKYD CVY++KL +G FIYLLLY
Sbjct: 718 KENMFCKLEKSLYGLKQSPRQWYKRFDKFMLRQKYTRSKYDHCVYLRKLHDGSFIYLLLY 777
Query: 181 VADMFITSRSMVEIDRLKSQLSQEFEMKGMGAAKKILGMEIKRERSIKKLYSSQKGYIER 240
V DM I S++ EI++LK+QL+ EFEMK +G AKKILGMEI R+R + +L +QK Y++R
Sbjct: 778 VDDMLIASKNKEEIEKLKTQLNGEFEMKDLGEAKKILGMEISRDRKLGRLCLTQKEYLKR 837
Query: 241 VVSRFGMQN-AKVVSTPLAPHFRLSERQSSTTTVEKDHMDCVPYASAVGSLMYAMVCTRP 299
V+ RFG+ + +K VSTPLA HF+LS S EK +M VPYASAVGSLMYAMVCTRP
Sbjct: 838 VLKRFGISDESKPVSTPLASHFKLSANLSPRDAAEKAYMSKVPYASAVGSLMYAMVCTRP 897
Query: 300 DISQAVSVVSRFMENLGKTHWEAVKWVLRYLKGTVDMCLFL 340
DIS AV VVSR+M N GK HW+AVKW+LRY+ TVD+ L
Sbjct: 898 DISYAVGVVSRYMHNPGKEHWQAVKWILRYILNTVDVGLVF 938
>KYP48513.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1032
Score = 449 bits (1155), Expect = e-147, Method: Compositional matrix adjust.
Identities = 213/338 (63%), Positives = 261/338 (77%)
Query: 1 MQEEMESLHKNETWEVVPLPEGKSVIGCKWVYKKKEDSSEIKGTRYKAKLVAKGYAQKEG 60
M EE+ESLHKN TW + LP+GK + CKW+YKKK+ ++ R KA+LV KG+ QKEG
Sbjct: 530 MNEEIESLHKNNTWNLTKLPKGKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGFYQKEG 589
Query: 61 VDYNEIFSPIVKHTYIRVLLSIVAHGDLELEQLDVKTAFLHGDLEEEIYMAQPEGYKVEG 120
+D+NEIFSP+V+HT IR+LL+ VA DLELEQLDVKTAFLHG+LEEEIYM QPEG+ V
Sbjct: 590 IDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPS 649
Query: 121 KENQVCRLRKSLYRLKQSPRQWYKRFDFFMLKHGFRRSKYDCCVYIKKLREGDFIYLLLY 180
KE+ VC+L+KSLY LKQ+PRQWYK+FD FM+ G+ RSKYD C+Y ++ +G FIYLLLY
Sbjct: 650 KEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLY 709
Query: 181 VADMFITSRSMVEIDRLKSQLSQEFEMKGMGAAKKILGMEIKRERSIKKLYSSQKGYIER 240
V DM I SR I +LK+QL+ EFEMK +GAAKKILGMEI R+R + KL+ SQ+ YIER
Sbjct: 710 VDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIER 769
Query: 241 VVSRFGMQNAKVVSTPLAPHFRLSERQSSTTTVEKDHMDCVPYASAVGSLMYAMVCTRPD 300
++ RF M N K VSTPLA HF+LS T E + M VPYASAVGSLMYAMVCTRPD
Sbjct: 770 LLDRFNMNNCKPVSTPLAAHFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYAMVCTRPD 829
Query: 301 ISQAVSVVSRFMENLGKTHWEAVKWVLRYLKGTVDMCL 338
++ AVS+VSR+M N GK HW AVKW+ RYLKGT ++ L
Sbjct: 830 LAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIGL 867