BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g2090.1
(119 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_008393076.1 PREDICTED: uncharacterized protein LOC103455257 [... 162 5e-48
AAK70406.1 pol polyprotein [Citrus x paradisi] 163 1e-47
KYP67484.1 Retrovirus-related Pol polyprotein from transposon TN... 162 3e-45
>XP_008393076.1 PREDICTED: uncharacterized protein LOC103455257 [Malus domestica]
Length = 253
Score = 162 bits (411), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 94/115 (81%)
Query: 2 LQSTVALPTTEARYIAMAEGVKEALWLWGLLDDLGIKQECADVWCDSQSTIHLAKNQVHH 61
+ +TVAL TTEA Y+A+ E +KE +WL GLLDDLG++Q+ +V CDSQS IHLAKNQVHH
Sbjct: 135 MNNTVALSTTEAEYMAVTEAIKEVIWLQGLLDDLGVQQDHVNVHCDSQSAIHLAKNQVHH 194
Query: 62 ARTKHIDVRYHFVRDVVEEGDVSLMKVHTDENPTDMLTKVVTCSKFQHCLELLQI 116
ARTKHIDVR+HFVR+++++GD+ L K+ T +NP DMLTK V+ KF+HCL+L+
Sbjct: 195 ARTKHIDVRFHFVREIIDDGDILLQKIETADNPADMLTKPVSLHKFKHCLDLIDF 249
>AAK70406.1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 163 bits (412), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 77/116 (66%), Positives = 95/116 (81%)
Query: 1 MLQSTVALPTTEARYIAMAEGVKEALWLWGLLDDLGIKQECADVWCDSQSTIHLAKNQVH 60
+LQST+AL TTEA YIA E VKEA+WL GLL DLG+ QE V+CD+QS I LAKNQ +
Sbjct: 178 ILQSTIALSTTEAEYIAATEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSAIFLAKNQTY 237
Query: 61 HARTKHIDVRYHFVRDVVEEGDVSLMKVHTDENPTDMLTKVVTCSKFQHCLELLQI 116
HARTKHIDV+YH+VR+++E GDV L K+ T +NP+DMLTKVV+ KFQHCL+L+QI
Sbjct: 238 HARTKHIDVKYHYVREIIEGGDVLLKKIDTKDNPSDMLTKVVSEVKFQHCLKLIQI 293
>KYP67484.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 561
Score = 162 bits (411), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 77/115 (66%), Positives = 92/115 (80%)
Query: 2 LQSTVALPTTEARYIAMAEGVKEALWLWGLLDDLGIKQECADVWCDSQSTIHLAKNQVHH 61
LQSTVAL TTEA Y+A+ E VKEA+WL GLL +LGI Q+ V CDSQS I LAKNQ +H
Sbjct: 444 LQSTVALSTTEAEYMALTEAVKEAIWLQGLLGELGILQKHVKVHCDSQSAIMLAKNQTYH 503
Query: 62 ARTKHIDVRYHFVRDVVEEGDVSLMKVHTDENPTDMLTKVVTCSKFQHCLELLQI 116
ARTKHIDVRYHF+R+++EEG V++ K+ T ENP DMLTKVV KFQHCL+L+ I
Sbjct: 504 ARTKHIDVRYHFIREIIEEGGVAIQKIRTTENPADMLTKVVDSIKFQHCLDLINI 558