BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0020.1
(197 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP57305.1 Retrovirus-related Pol polyprotein from transposon TN... 163 2e-44
XP_015080794.1 PREDICTED: uncharacterized protein LOC107024343 [... 157 5e-41
KYP63308.1 Retrovirus-related Pol polyprotein from transposon TN... 151 5e-40
>KYP57305.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 530
Score = 163 bits (413), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 139/259 (53%), Gaps = 68/259 (26%)
Query: 1 MNTTAYLVNISPSTSIECKTPNEVWSGNPGNYENLRIFGCPTYAHV-------------- 46
+N AYLVN+SPST+I+ KTP EVWSG P +Y LRIFGCP YAHV
Sbjct: 4 VNAAAYLVNMSPSTAIDLKTPQEVWSGKPSDYSGLRIFGCPAYAHVNDGKLEPRAMKCIF 63
Query: 47 --------------------KEAMVTQKVT------------------PVDTREGVGKQV 68
K+ ++++ VT T +GV ++V
Sbjct: 64 LGYPTGVKGYRLWCTENNRTKKIVISRDVTFNESAMFGQKEEVENLAGNKSTNKGVHQKV 123
Query: 69 EFEID--TPEEVRPQVDEQAEEDEPKIVYYSVARNRGKRDIRAPERYGMADI-------- 118
EFE++ E + P ++EP+ S+A R +R+IR P RY AD+
Sbjct: 124 EFEVEDSNKENLNPVEQSSNVQEEPQ----SIATRRTRREIRKPTRY--ADVTNVVDTNS 177
Query: 119 VAFTLSVGESIDGGEPCTYEEAKRSDESMQWSLPMNEEIESLRKNRAWVLAEQPKGRKIV 178
VA+ L VGE++D EP +Y+EA +S E+ +W + M+EE++SL+KN+ W L P+G K V
Sbjct: 178 VAYALLVGENLDSDEPKSYKEAIQSKEASKWLIAMDEEMQSLKKNQTWELVPLPRGVKPV 237
Query: 179 GSKWVFKKKEGIPGVEDAR 197
G KWV K+KEGIPGVE +R
Sbjct: 238 GCKWVLKRKEGIPGVEPSR 256
>XP_015080794.1 PREDICTED: uncharacterized protein LOC107024343 [Solanum pennellii]
Length = 1892
Score = 157 bits (397), Expect = 5e-41, Method: Composition-based stats.
Identities = 93/246 (37%), Positives = 129/246 (52%), Gaps = 49/246 (19%)
Query: 1 MNTTAYLVNISPSTSIECKTPNEVWSGNPGNYENLRIFGCPTYAHVKEAMVTQK------ 54
++T +++VN SP+++I+ KTPNEVWSG P NY LRIFGCPTY HV E + +
Sbjct: 1196 VHTASHIVNRSPASAIDFKTPNEVWSGEPSNYSYLRIFGCPTYYHVNEGKLEPRSKKAIF 1255
Query: 55 VTPVDTREG------------VGKQVEF----------------------EIDTPEEVRP 80
V VD +G V + V F +++ P E+
Sbjct: 1256 VGYVDGVKGYKLWCLSLLKFVVSRDVTFDESSILDPRKVSMELSRNENNEQVELPVELTK 1315
Query: 81 QVDEQAEEDEPKIVY-------YSVARNRGKRDIRAPERYGMAD--IVAFTLSVGESIDG 131
+ D++ + DE K Y++A+ R KR IR PER + I ++ E I
Sbjct: 1316 KRDQETQSDESKDAEELASNEPYTIAKGRDKRRIRKPERLIEQENLIAQAFVAAEEEIKD 1375
Query: 132 GEPCTYEEAKRSDESMQWSLPMNEEIESLRKNRAWVLAEQPKGRKIVGSKWVFKKKEGIP 191
EP +Y EA ++ QW L M EE+ESL +N WVL ++PKG + VG KWV+KKKEGIP
Sbjct: 1376 LEPSSYIEATSCKDAAQWQLAMMEEMESLHRNETWVLVKRPKGMRTVGCKWVYKKKEGIP 1435
Query: 192 GVEDAR 197
VE AR
Sbjct: 1436 EVEAAR 1441
>KYP63308.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 516
Score = 151 bits (382), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 133/254 (52%), Gaps = 57/254 (22%)
Query: 1 MNTTAYLVNISPSTSIECKTPNEVWSGNPGNYENLRIFGCPTYAHVKE------------ 48
+++ Y +N PST++E KTP EVWSG +Y LR+FGC YAH+K+
Sbjct: 153 VSSAVYCINRCPSTALEFKTPQEVWSGRKVDYSELRVFGCIAYAHIKQDKLEPRALKFIF 212
Query: 49 ---------------------AMVTQKV-------------TPVDTREGVGKQ-----VE 69
++++ V + V+ E Q VE
Sbjct: 213 IGYPEGVKGYRLWCLEPGYKKCLISRDVVFNEIEMANLVKPSKVEIHEKSQDQTIKIEVE 272
Query: 70 FEIDTPEEVRPQ-----VDEQAEEDEPKIVYYSVARNRGKRDIRAPERYGMADIVAFTLS 124
F + T + Q + ++ +++E I YS+AR+R +R +AP+RYG AD+V+F +
Sbjct: 273 FTVITEAKAATQRQQHILQQELDDEERSIQSYSLARDRERRAHKAPQRYGHADLVSFAFT 332
Query: 125 VGESI-DGGEPCTYEEAKRSDESMQWSLPMNEEIESLRKNRAWVLAEQPKGRKIVGSKWV 183
VG + D EP +Y EA RS + W M EE+ SL KN+ W+L ++PK +KIVGSKW+
Sbjct: 333 VGLDLEDHDEPKSYSEAMRSKDKNSWLKAMKEEMGSLEKNQTWILVDKPKEQKIVGSKWI 392
Query: 184 FKKKEGIPGVEDAR 197
FK+K+GI G+E AR
Sbjct: 393 FKRKKGILGIEKAR 406