BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0040.1
(186 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KHN13198.1 Retrovirus-related Pol polyprotein from transposon TN... 139 8e-37
KHN13199.1 Retrovirus-related Pol polyprotein from transposon TN... 139 9e-37
KZV56298.1 hypothetical protein F511_00295 [Dorcoceras hygrometr... 141 9e-36
>KHN13198.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 341
Score = 139 bits (349), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 115/191 (60%), Gaps = 9/191 (4%)
Query: 1 MLEGESWKDHMDELNRVFLVLANIDVKFEEEDKAIPLLASLPPSYESFVDSFMSGKTTTT 60
M EGES H+D N+V L L NIDV ++ED+A+ LL+SLP +Y++FVD+ + G+++ +
Sbjct: 109 MHEGESIHKHIDNFNQVVLSLKNIDVAVDDEDQAVLLLSSLPRAYDNFVDTIIFGRSSLS 168
Query: 61 FEDVKAALNSKELRRR---SMEESSSEDGLVVRG--SSQHVVDRKGRSRSKLKHKKYRCF 115
E+VK AL S EL+RR S +SS +GL+VRG + R+ +C
Sbjct: 169 MEEVKTALQSWELKRRITDSYGGTSSGEGLMVRGRMDERKSFQRRRSKSRSKNKNNNKCH 228
Query: 116 NCKKEGHFKRNCPELKKKPAEAAVIEEDDGIVLEIIEECDEAIVLAINACFAEDSRILDT 175
NC+KEGH+KRNCPELKK + G + EE D VL +++ +D ILD+
Sbjct: 229 NCQKEGHWKRNCPELKKDKVSTSEF----GGAAVVSEESDGGNVLFVSSNVNDDDWILDS 284
Query: 176 GCTFHVCPHKE 186
CTFH+ P+++
Sbjct: 285 ACTFHMTPNRD 295
>KHN13199.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 344
Score = 139 bits (349), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 116/191 (60%), Gaps = 9/191 (4%)
Query: 1 MLEGESWKDHMDELNRVFLVLANIDVKFEEEDKAIPLLASLPPSYESFVDSFMSGKTTTT 60
M EGES H+D N+V L L NIDV ++ED+A+ LL+SLP +Y++FVD+ + G+++ +
Sbjct: 112 MHEGESIHKHIDNFNQVVLSLKNIDVAVDDEDQAVLLLSSLPRAYDNFVDTIIFGRSSLS 171
Query: 61 FEDVKAALNSKELRRR---SMEESSSEDGLVVRG--SSQHVVDRKGRSRSKLKHKKYRCF 115
E+VK AL S EL+RR S +SS +GL+VRG + R+ +C
Sbjct: 172 MEEVKTALQSWELKRRITDSYGGTSSGEGLMVRGRMDERKSFQRRRSKSRSKNKNNNKCH 231
Query: 116 NCKKEGHFKRNCPELKKKPAEAAVIEEDDGIVLEIIEECDEAIVLAINACFAEDSRILDT 175
NC+KEGH+KRNCPELKK + + G + EE D VL +++ +D ILD+
Sbjct: 232 NCQKEGHWKRNCPELKKDKVSTS----EFGGAAVVSEESDGGNVLFVSSNVNDDDWILDS 287
Query: 176 GCTFHVCPHKE 186
CTFH+ P+++
Sbjct: 288 ACTFHMTPNRD 298
>KZV56298.1 hypothetical protein F511_00295 [Dorcoceras hygrometricum]
Length = 1309
Score = 141 bits (356), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 120/195 (61%), Gaps = 22/195 (11%)
Query: 3 EGESWKDHMDELNRVFLVLANIDVKFEEEDKAIPLLASLPPSYESFVDSFMSGKTTTTFE 62
EG+ K HMDE N++ L L N+D+K +ED AI +L+SLP SYE FVD+ + GK T T
Sbjct: 113 EGKDLKKHMDEFNKIILDLKNVDIKITDEDCAILMLSSLPRSYEHFVDTMLYGKETLTMA 172
Query: 63 DVKAALNSKELRRRS-MEESSSEDGLVVRGSSQHVVDRK---GRSRSKLKHK-KYRCFNC 117
+VK+ALNSKEL +++ + S+ +GL VRG + R G+ RS+ + + K +CF C
Sbjct: 173 EVKSALNSKELHKKNETKMESTGEGLNVRGRTYKRESRNEKGGKHRSQSRTRGKLKCFVC 232
Query: 118 KKEGHFKRNC-------PELKKKPAEAAVIEEDDGIVLEIIEECDEAIVLAINACFAEDS 170
KEGHFK++C PE +K P +AAV+ DG + A VL ++ +D
Sbjct: 233 HKEGHFKKDCPDRRARNPERRKDPGDAAVV--SDGY--------ESAEVLVVSRTNKQDC 282
Query: 171 RILDTGCTFHVCPHK 185
++D+GC+FH+CP K
Sbjct: 283 WVMDSGCSFHMCPIK 297