BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0060.1
(419 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ADB85430.1 putative retrotransposon protein [Phyllostachys edulis] 647 0.0
BAA22288.1 polyprotein [Oryza australiensis] 657 0.0
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis] 648 0.0
>ADB85430.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/402 (75%), Positives = 343/402 (85%)
Query: 10 AIAAHYDYEIWQMDVKTAFMNGKLEKDVYMTQPEGFENSKNAGKVCKLQRSIYGLKQASR 69
AIAA++DYEIWQMDVKTAF+NG L +DVYMTQPEGF + NA KVCKLQ+SIYGLKQASR
Sbjct: 473 AIAAYFDYEIWQMDVKTAFLNGNLHEDVYMTQPEGFVDPNNASKVCKLQKSIYGLKQASR 532
Query: 70 SWNFRFDEKIKEFGFLKNEEESFVYKKVSGSNLVFLVLYVDDILIVGNDIHMLNSVKEWL 129
SWN RFDE+IK FGF+KN+EE VY KVSGS LV L+LYVDDIL+VGNDI ML SVK L
Sbjct: 533 SWNIRFDEEIKRFGFIKNKEEPCVYMKVSGSTLVILILYVDDILLVGNDIPMLESVKSSL 592
Query: 130 RKCFSMNDLGDAEYILGIKIYRDRSRRMIGLGQETYIDKVLGRFKMEDSKRGFLPMTHGT 189
RK FSM DLGDA YILGI+IYRDRS+R+IGL QE YIDKVL RF M++SKRGFLPM HG
Sbjct: 593 RKSFSMKDLGDAAYILGIRIYRDRSKRLIGLSQEMYIDKVLNRFNMQNSKRGFLPMAHGI 652
Query: 190 TLSKTQCPRDPDELTHMKKVPYASVIGSIMYAMVCTRPDVSYALSMCSRYQSNPGEKHWT 249
LSK QCP DE M +PYAS IGSIMYAM+CTRPDVSYALS+ SRYQ++P E HWT
Sbjct: 653 NLSKNQCPTTTDERDKMSDIPYASAIGSIMYAMICTRPDVSYALSVTSRYQADPSEGHWT 712
Query: 250 AAKNILKYLRRTKDHFLIYGGKDELIVEGHVDASFQTDRDDFRSQSGYVFCLNGGAVSWK 309
A KNILKYLRRTKD FL+YGG +EL+V G+ DASFQTD+DD+RSQSG+VF LNGGAVSWK
Sbjct: 713 AVKNILKYLRRTKDVFLVYGGDEELVVNGYTDASFQTDKDDYRSQSGFVFILNGGAVSWK 772
Query: 310 SSKQTTVADSTIEAEYLAASEAAKEGLWIKKFISELGVVPSIENGVTLYCDNNGAIAQAK 369
SSKQ TVADST EAEY+AASEAAKEG+WI+ FI+ELG+VPS + + LYCDNNGAIAQAK
Sbjct: 773 SSKQETVADSTTEAEYIAASEAAKEGVWIRNFITELGMVPSASSPMDLYCDNNGAIAQAK 832
Query: 370 EPRAHQKSKDILRKYHVIREITERKDVVICKVDTDDNVADPL 411
EPR+HQKSK ILR+YH+IRE+ +R DV ICKV TD N+ADPL
Sbjct: 833 EPRSHQKSKHILRRYHLIRELVDRGDVKICKVHTDLNIADPL 874
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/411 (74%), Positives = 355/411 (86%)
Query: 1 MLKSIRIILAIAAHYDYEIWQMDVKTAFMNGKLEKDVYMTQPEGFENSKNAGKVCKLQRS 60
MLKSIRIILAIAA++DYEIWQMDVKTAF+NG L +DVYM QP+GF + ++ GK+CKLQ+S
Sbjct: 884 MLKSIRIILAIAAYFDYEIWQMDVKTAFLNGNLSEDVYMIQPQGFVDPESPGKICKLQKS 943
Query: 61 IYGLKQASRSWNFRFDEKIKEFGFLKNEEESFVYKKVSGSNLVFLVLYVDDILIVGNDIH 120
IYGLKQASRSWN RFDE IK FGF+KNEEE+ VYKKVSGS +VFL+LYVDDIL++GNDI
Sbjct: 944 IYGLKQASRSWNIRFDEVIKGFGFIKNEEEACVYKKVSGSAIVFLILYVDDILLIGNDIP 1003
Query: 121 MLNSVKEWLRKCFSMNDLGDAEYILGIKIYRDRSRRMIGLGQETYIDKVLGRFKMEDSKR 180
ML SVK L+ FSM DLG+A YILGI+IYRDRS+R+IGL Q TYIDKVL RF M DSK+
Sbjct: 1004 MLESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMHDSKK 1063
Query: 181 GFLPMTHGTTLSKTQCPRDPDELTHMKKVPYASVIGSIMYAMVCTRPDVSYALSMCSRYQ 240
GFLPM+HG LSK QCP+ DE M VPYAS IGSIMYAM+CTRPDVSYALS SRYQ
Sbjct: 1064 GFLPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTRPDVSYALSATSRYQ 1123
Query: 241 SNPGEKHWTAAKNILKYLRRTKDHFLIYGGKDELIVEGHVDASFQTDRDDFRSQSGYVFC 300
S+PGE HWTA KNILKYLRRTKD FL+YGG+++L+V G+ DASFQTD+DD+RSQSG+VFC
Sbjct: 1124 SDPGEGHWTAVKNILKYLRRTKDMFLVYGGEEDLVVSGYTDASFQTDKDDYRSQSGFVFC 1183
Query: 301 LNGGAVSWKSSKQTTVADSTIEAEYLAASEAAKEGLWIKKFISELGVVPSIENGVTLYCD 360
LNGGAVSWKSSKQ TVADST EAEY+AASEAAKE +WIKKF+SELGV+ S ++LYCD
Sbjct: 1184 LNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSELGVMTSTTGPMSLYCD 1243
Query: 361 NNGAIAQAKEPRAHQKSKDILRKYHVIREITERKDVVICKVDTDDNVADPL 411
N+GAIAQAKEPR+HQKSK ILR+YH+IREI +R DV ICKV TD N+ADPL
Sbjct: 1244 NSGAIAQAKEPRSHQKSKHILRRYHLIREIVDRGDVKICKVHTDLNIADPL 1294
>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/411 (74%), Positives = 353/411 (85%)
Query: 1 MLKSIRIILAIAAHYDYEIWQMDVKTAFMNGKLEKDVYMTQPEGFENSKNAGKVCKLQRS 60
MLKSIRIILAIAA++DYEIWQMDVKTAF+NGKL +DVYMTQPEGF + NA KVCKLQ+S
Sbjct: 880 MLKSIRIILAIAAYFDYEIWQMDVKTAFLNGKLSEDVYMTQPEGFVDPNNASKVCKLQKS 939
Query: 61 IYGLKQASRSWNFRFDEKIKEFGFLKNEEESFVYKKVSGSNLVFLVLYVDDILIVGNDIH 120
IYGLKQASRSWN RFDE+IK FGF+KN+EE VY KVSGS LV L+LYVDDIL++GNDI
Sbjct: 940 IYGLKQASRSWNIRFDEEIKRFGFVKNKEEPCVYMKVSGSTLVILILYVDDILLIGNDIP 999
Query: 121 MLNSVKEWLRKCFSMNDLGDAEYILGIKIYRDRSRRMIGLGQETYIDKVLGRFKMEDSKR 180
ML SVK L+ FSM DLG+A YILGIKIYRDRSRR+IGL Q TYIDKVL RF M+++K+
Sbjct: 1000 MLESVKASLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYIDKVLIRFNMQNTKK 1059
Query: 181 GFLPMTHGTTLSKTQCPRDPDELTHMKKVPYASVIGSIMYAMVCTRPDVSYALSMCSRYQ 240
GFLPM+HG + SK+Q P DE M +PYAS IGSIMYAM+CTR DVSYALS+ SRYQ
Sbjct: 1060 GFLPMSHGISPSKSQRPSTTDERDRMNGIPYASAIGSIMYAMICTRQDVSYALSVTSRYQ 1119
Query: 241 SNPGEKHWTAAKNILKYLRRTKDHFLIYGGKDELIVEGHVDASFQTDRDDFRSQSGYVFC 300
++PGE HWTA KNILKYLRRTKD FLIYGG +EL+V G+ DASFQTD+DD+RSQSG+VF
Sbjct: 1120 ADPGECHWTAVKNILKYLRRTKDAFLIYGGDEELVVNGYTDASFQTDKDDYRSQSGFVFI 1179
Query: 301 LNGGAVSWKSSKQTTVADSTIEAEYLAASEAAKEGLWIKKFISELGVVPSIENGVTLYCD 360
LNGGAVSWKSSKQ TVADST +AEY+AASEAAKEG+WI+ FI+ELGVVPS + + LYCD
Sbjct: 1180 LNGGAVSWKSSKQETVADSTTKAEYIAASEAAKEGVWIRNFIAELGVVPSASSPMDLYCD 1239
Query: 361 NNGAIAQAKEPRAHQKSKDILRKYHVIREITERKDVVICKVDTDDNVADPL 411
NNGAIAQAKEPR+HQKSK ILR+YH+IRE+ +R DV ICK+ TD NVADPL
Sbjct: 1240 NNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICKIHTDLNVADPL 1290