BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0140.1
(208 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ERM98543.1 hypothetical protein AMTR_s04311p00004950, partial [A... 256 8e-83
CAN71782.1 hypothetical protein VITISV_028677 [Vitis vinifera] 273 2e-81
AAX96392.1 retrotransposon protein, putative, Ty1-copia sub-clas... 249 5e-78
>ERM98543.1 hypothetical protein AMTR_s04311p00004950, partial [Amborella
trichopoda]
Length = 288
Score = 256 bits (653), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 133/268 (49%), Positives = 166/268 (61%), Gaps = 62/268 (23%)
Query: 1 MENSYPLSTPMVVRSLDVLKDQFRPKEEDETLLGPEVPYLSVIGA--------------- 45
M+ S+PLS+PMVVRSLDV KD FRP+EE E LLGPEVPYLS IGA
Sbjct: 13 MDKSHPLSSPMVVRSLDVEKDPFRPREEHEELLGPEVPYLSAIGALMYLANCTRPDIAFS 72
Query: 46 ---------------------------------LSYLAQCTRPDIAFA------------ 60
L Y C I +A
Sbjct: 73 VNLLARFSSAPTYRHWKGIKHILRYLQGTIDKGLFYSNNCGSQLIGYADAGYLSDPHKAR 132
Query: 61 --TGYVFTSGGTTFSWRSSKQSMPATSSNHAEIIALHEATRECVWLRSIIEHIRSSSGLD 118
TGY+FT G T SWRS+KQ++ ATSSNHAEI+A+HEA+RECVWLRS+ +HIR + GL
Sbjct: 133 SQTGYLFTCGDTAISWRSTKQTLVATSSNHAEILAIHEASRECVWLRSMTQHIRGTCGLT 192
Query: 119 LITNSPTVIHEDNSACIAQIREGYIKGDRTKHISPKLFYSHHLQKDNEIDIQKIQSCENY 178
PT+++EDN+ACIAQ++ GYIKGDRTKHISPK F++H+LQ++ +ID+Q+I+S +N
Sbjct: 193 SNKEVPTILYEDNAACIAQLKGGYIKGDRTKHISPKFFFTHNLQENGDIDVQQIRSSDNL 252
Query: 179 VDLFTKSLPTITFRKLVKGIGMRRLNNL 206
DLFTKSLPT TF K+V IGMRRL +L
Sbjct: 253 ADLFTKSLPTSTFEKMVHKIGMRRLKDL 280
>CAN71782.1 hypothetical protein VITISV_028677 [Vitis vinifera]
Length = 1383
Score = 273 bits (698), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 136/229 (59%), Positives = 163/229 (71%), Gaps = 21/229 (9%)
Query: 1 MENSYPLSTPMVVRSLDVLKDQFRPKEEDETLLGPEVPYLSVIGALSYLAQC-------T 53
M+ ++PLS+PMVVRSLDV D FRP E+DE LLGPEVPYLS IGAL YLA C
Sbjct: 1146 MDKAHPLSSPMVVRSLDVKNDPFRPCEKDEELLGPEVPYLSAIGALMYLANCLFYSRESK 1205
Query: 54 RPDIAFA--------------TGYVFTSGGTTFSWRSSKQSMPATSSNHAEIIALHEATR 99
+ + +A TGYVF GT SWRS KQ+M ATSSNH+EI+A+HEA+R
Sbjct: 1206 QQLLGYADAGYLSDPHKGRSQTGYVFNCNGTAISWRSVKQTMVATSSNHSEILAIHEASR 1265
Query: 100 ECVWLRSIIEHIRSSSGLDLITNSPTVIHEDNSACIAQIREGYIKGDRTKHISPKLFYSH 159
EC+WLRSII+HIR S GL I PT++ EDN ACIAQI YIKGDRTKHISPK F +H
Sbjct: 1266 ECIWLRSIIQHIRESCGLSSIKGDPTILFEDNVACIAQITGDYIKGDRTKHISPKFFCTH 1325
Query: 160 HLQKDNEIDIQKIQSCENYVDLFTKSLPTITFRKLVKGIGMRRLNNLMM 208
LQK EID+Q+I+S +N DLFTKSLPT TF+KL+ IGMR+L ++ M
Sbjct: 1326 ELQKSGEIDVQQIRSSDNLADLFTKSLPTSTFKKLIHRIGMRQLKDIDM 1374
>AAX96392.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] ABA91902.1 retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 460
Score = 249 bits (637), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 127/231 (54%), Positives = 157/231 (67%), Gaps = 26/231 (11%)
Query: 1 MENSYPLSTPMVVRSLDVLKDQFRPKEEDETLLGPEVPYLSVIGALSYLAQCTRPDIAFA 60
M +YP TP+VVRSL KD FRP+EE E +LGPE PYLS+IGAL Y A TRP+IAFA
Sbjct: 218 MNKAYPNKTPIVVRSLCKEKDIFRPREEGEEILGPEYPYLSLIGALMYFANSTRPNIAFA 277
Query: 61 -------------------------TGYVFTSGGTTFSWRSSKQSMPATSSNHAEIIALH 95
TG+VF GGT SW+SSKQ++ ATS+NH+EIIAL
Sbjct: 278 KTADPSLVGYTVAGYIYDPHNTISQTGFVFLHGGTAISWKSSKQTLVATSTNHSEIIALF 337
Query: 96 EATRECVWLRSIIEHIRSSSGLDLITNSPTVIHEDNSACIAQIREGYIKGDRTKHISPKL 155
EA+RECVWLR +I HI S G+ T SPT+I+EDN+ACI Q++ GYIK + TKHI+ KL
Sbjct: 338 EASRECVWLRRMINHIEQSCGIG-STESPTIIYEDNAACITQMQTGYIKSNSTKHIASKL 396
Query: 156 FYSHHLQKDNEIDIQKIQSCENYVDLFTKSLPTITFRKLVKGIGMRRLNNL 206
FY H LQ+ EI+I + +S +N DLFTKSLPT +F + VKGIGMR L +L
Sbjct: 397 FYPHELQQSGEINILQTKSYDNLADLFTKSLPTSSFERCVKGIGMRLLRDL 447