BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0220.1
(322 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010274028.1 PREDICTED: pentatricopeptide repeat-containing pr... 407 e-141
XP_010650970.1 PREDICTED: pentatricopeptide repeat-containing pr... 402 e-139
XP_002276778.1 PREDICTED: pentatricopeptide repeat-containing pr... 394 e-136
>XP_010274028.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46870
[Nelumbo nucifera] XP_010274029.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g46870
[Nelumbo nucifera]
Length = 254
Score = 407 bits (1046), Expect = e-141, Method: Compositional matrix adjust.
Identities = 199/255 (78%), Positives = 224/255 (87%), Gaps = 3/255 (1%)
Query: 66 MAIRSFWRSKIPLIASNTIQHLIKPLNESSSLVILQYPIHEINTKPVFVSDSFFRYYHDG 125
MAIR+ RSK+P + S ++ LI P+ S + LQ I EI++K F S FR YHDG
Sbjct: 1 MAIRAISRSKVPFLVSMLVRELIIPIERVSMPIKLQNAIQEIDSKKPF---SNFRRYHDG 57
Query: 126 RPRGPLWRGKKLIGKEALFVILGMKRFKGDEENLNKFIKTHVLRLLKMDMIAVLNELERQ 185
RPRGPLWRGKKL+GKEALFVILG+KRFK DEE L+KFIK+HVLRLLKMDMIAVLNELERQ
Sbjct: 58 RPRGPLWRGKKLLGKEALFVILGLKRFKDDEEKLDKFIKSHVLRLLKMDMIAVLNELERQ 117
Query: 186 EEVSLALKMFRIIRKQDWYKADVFMYKDLIISLAKSKKMEEAIQVWESMREEDLFPDSQT 245
EEV L LKMF++I+KQDWYK DV++YKDLII+LAK KKM+EA+QVWE+MR+EDLFPD QT
Sbjct: 118 EEVPLGLKMFKVIQKQDWYKPDVYLYKDLIIALAKCKKMDEAMQVWETMRKEDLFPDYQT 177
Query: 246 YAEVIRGFLRYGSPADAMNIYEDMKKSPDPPEELPFRILLKGLLPHPLLRNRVKQDFEEI 305
YAEVIRGFLRYGSPADAMN+YEDMKKSPDPPEELPFRILLKGLLPHPLLRNRVKQDFEEI
Sbjct: 178 YAEVIRGFLRYGSPADAMNVYEDMKKSPDPPEELPFRILLKGLLPHPLLRNRVKQDFEEI 237
Query: 306 FPDRNIYDPPEEIFG 320
FPDRN+YDPPEEIFG
Sbjct: 238 FPDRNVYDPPEEIFG 252
>XP_010650970.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46870
[Vitis vinifera] CBI16043.3 unnamed protein product,
partial [Vitis vinifera]
Length = 252
Score = 402 bits (1032), Expect = e-139, Method: Compositional matrix adjust.
Identities = 198/258 (76%), Positives = 230/258 (89%), Gaps = 9/258 (3%)
Query: 66 MAIRSFWRSKIPLIASNTIQHLIK-PLNESSSLVILQYPIHEINT-KPVFVSDSFFRYYH 123
MAIR+F RSKIP+ ++ +Q+LIK P+ ES+ Q+P+ E+ + KP+ S + YH
Sbjct: 1 MAIRAFSRSKIPIFSAKILQNLIKAPIKESTRF---QFPVLEVGSYKPLLGS----KLYH 53
Query: 124 DGRPRGPLWRGKKLIGKEALFVILGMKRFKGDEENLNKFIKTHVLRLLKMDMIAVLNELE 183
DGRPRGPLWRGKKLIGKEALFVILG+KRFK DEENL KFIK+HVLRLLKMDM+AVL ELE
Sbjct: 54 DGRPRGPLWRGKKLIGKEALFVILGLKRFKDDEENLRKFIKSHVLRLLKMDMVAVLTELE 113
Query: 184 RQEEVSLALKMFRIIRKQDWYKADVFMYKDLIISLAKSKKMEEAIQVWESMREEDLFPDS 243
RQEEVSLA+++FR+IRKQDWYK DV++YKDLII+LAK KKM++A+Q+WESMR+EDLFPD
Sbjct: 114 RQEEVSLAVEVFRVIRKQDWYKPDVYLYKDLIIALAKCKKMDDAMQLWESMRKEDLFPDY 173
Query: 244 QTYAEVIRGFLRYGSPADAMNIYEDMKKSPDPPEELPFRILLKGLLPHPLLRNRVKQDFE 303
QTY EVIRGFLRYGSPADAMNIYEDMKKSPDPPEELPFRILLKGLLPHPLLRNRVKQDFE
Sbjct: 174 QTYTEVIRGFLRYGSPADAMNIYEDMKKSPDPPEELPFRILLKGLLPHPLLRNRVKQDFE 233
Query: 304 EIFPDRNIYDPPEEIFGM 321
EIFPDR++YDPPEEIFG+
Sbjct: 234 EIFPDRHVYDPPEEIFGV 251
>XP_002276778.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46870
[Vitis vinifera] XP_010650828.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g46870
[Vitis vinifera] XP_010650829.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g46870
[Vitis vinifera] XP_010650830.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g46870
[Vitis vinifera] XP_010650831.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g46870
[Vitis vinifera] XP_010650832.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g46870
[Vitis vinifera] CBI15841.3 unnamed protein product,
partial [Vitis vinifera]
Length = 252
Score = 394 bits (1012), Expect = e-136, Method: Compositional matrix adjust.
Identities = 194/258 (75%), Positives = 227/258 (87%), Gaps = 9/258 (3%)
Query: 66 MAIRSFWRSKIPLIASNTIQHLIK-PLNESSSLVILQYPIHEI-NTKPVFVSDSFFRYYH 123
MAIR+F RSKIP+ ++ +Q LIK P+ ES+ Q+P+ E+ + KP+F ++YH
Sbjct: 1 MAIRAFSRSKIPIFSAKILQSLIKSPIKESTKF---QFPVLEVASNKPLFG----LKHYH 53
Query: 124 DGRPRGPLWRGKKLIGKEALFVILGMKRFKGDEENLNKFIKTHVLRLLKMDMIAVLNELE 183
DGRPRGPLWRGKKLIGKEALFVILG+KRFK DEE L KFIK+HVLRLLKMDMIAVL ELE
Sbjct: 54 DGRPRGPLWRGKKLIGKEALFVILGLKRFKDDEEKLRKFIKSHVLRLLKMDMIAVLTELE 113
Query: 184 RQEEVSLALKMFRIIRKQDWYKADVFMYKDLIISLAKSKKMEEAIQVWESMREEDLFPDS 243
RQEEV+LA+++FR+ +KQDWYK DV++YKDLII+LAK KKM+ A+Q+WESMR+EDLFPD
Sbjct: 114 RQEEVTLAVEVFRVFQKQDWYKPDVYLYKDLIIALAKCKKMDNAMQLWESMRKEDLFPDY 173
Query: 244 QTYAEVIRGFLRYGSPADAMNIYEDMKKSPDPPEELPFRILLKGLLPHPLLRNRVKQDFE 303
QTY EVIRGFLR+GSPADAMNIYEDMKKSPDPPEELPFRILLKGLLPHPLLRNRVKQDFE
Sbjct: 174 QTYTEVIRGFLRHGSPADAMNIYEDMKKSPDPPEELPFRILLKGLLPHPLLRNRVKQDFE 233
Query: 304 EIFPDRNIYDPPEEIFGM 321
EIFPDR++YDPPEEIFG+
Sbjct: 234 EIFPDRHVYDPPEEIFGI 251