BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0230.1
(138 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010445454.1 PREDICTED: uncharacterized protein LOC104728123 [... 69 7e-11
XP_010695762.1 PREDICTED: uncharacterized protein LOC104908351 [... 64 1e-10
XP_009132217.1 PREDICTED: putative ribonuclease H protein At1g65... 65 7e-10
>XP_010445454.1 PREDICTED: uncharacterized protein LOC104728123 [Camelina sativa]
Length = 1064
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 38 TGLAVNTEKSSISCAGMSDVQKEDTRVVLEFQLGTLPIRYLGLPLLASRLAYKDCIPLIN 97
+GL ++ EKS+I AG+S KE+ F+ G+LP+RYLGLPLL R+ D +PLI
Sbjct: 604 SGLHISLEKSTIYTAGVSSAHKEEILQQFPFEYGSLPVRYLGLPLLPRRMTSGDYLPLIE 663
Query: 98 RIQARGTVLESQVL 111
+I++R T S++L
Sbjct: 664 KIRSRITSWTSRML 677
>XP_010695762.1 PREDICTED: uncharacterized protein LOC104908351 [Beta vulgaris
subsp. vulgaris]
Length = 125
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%)
Query: 30 VLCKLCWGTGLAVNTEKSSISCAGMSDVQKEDTRVVLEFQLGTLPIRYLGLPLLASRLAY 89
K +GL N EKS++ AG+++ +K D +++++ +G+ P++YLG+PL +L Y
Sbjct: 54 AFSKFSHASGLVANPEKSNLYTAGVTEEEKSDLQLIVKMPIGSFPLKYLGVPLTTRKLFY 113
Query: 90 KDCIPLINRIQA 101
++C PLI + A
Sbjct: 114 QECKPLIEKTVA 125
>XP_009132217.1 PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 541
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 38 TGLAVNTEKSSISCAGMSDVQKEDTRVVLEFQLGTLPIRYLGLPLLASRLAYKDCIPLIN 97
+GL ++ EKS++ AG+SD KED F G+LP+RYLGLPLL R+ D +PL+
Sbjct: 48 SGLRISLEKSTLYTAGISDNIKEDILASFPFSTGSLPVRYLGLPLLTKRMTVNDYLPLVE 107
Query: 98 RIQAR 102
+++ +
Sbjct: 108 KVRKK 112