BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0390.1
(262 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ERM98543.1 hypothetical protein AMTR_s04311p00004950, partial [A... 389 e-134
KYP43701.1 Retrovirus-related Pol polyprotein from transposon TN... 367 e-126
CAN60706.1 hypothetical protein VITISV_043852 [Vitis vinifera] 379 e-123
>ERM98543.1 hypothetical protein AMTR_s04311p00004950, partial [Amborella
trichopoda]
Length = 288
Score = 389 bits (999), Expect = e-134, Method: Compositional matrix adjust.
Identities = 181/260 (69%), Positives = 219/260 (84%), Gaps = 2/260 (0%)
Query: 1 MVVRSLDIKKDPYRPKEDNEAILGPEVPYLSAIGALLYLAQCTRPDISFAVNLLARFSSA 60
MVVRSLD++KDP+RP+E++E +LGPEVPYLSAIGAL+YLA CTRPDI+F+VNLLARFSSA
Sbjct: 23 MVVRSLDVEKDPFRPREEHEELLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARFSSA 82
Query: 61 PTKQHMMGVKHILRYLRGTTDMGLFYSKNSSDGSQVIGYTDAGYLSDPHKRILQTGYVFT 120
PT +H G+KHILRYL+GT D GLFYS N GSQ+IGY DAGYLSDPHK QTGY+FT
Sbjct: 83 PTYRHWKGIKHILRYLQGTIDKGLFYSNNC--GSQLIGYADAGYLSDPHKARSQTGYLFT 140
Query: 121 SGGTAFSWRSSKQSMPATSSNHSEIIALREATRECVWLRSIISHIRFSCDLPGITKSPTI 180
G TA SWRS+KQ++ ATSSNH+EI+A+ EA+RECVWLRS+ HIR +C L + PTI
Sbjct: 141 CGDTAISWRSTKQTLVATSSNHAEILAIHEASRECVWLRSMTQHIRGTCGLTSNKEVPTI 200
Query: 181 IYEDNAACIAQINEGYIKCDRTKHISPKLFFSHHLPKNGEIDIQKIQSCENYADLFTKSL 240
+YEDNAACIAQ+ GYIK DRTKHISPK FF+H+L +NG+ID+Q+I+S +N ADLFTKSL
Sbjct: 201 LYEDNAACIAQLKGGYIKGDRTKHISPKFFFTHNLQENGDIDVQQIRSSDNLADLFTKSL 260
Query: 241 PTTTFRKLVQSIGMRSLNNL 260
PT+TF K+V IGMR L +L
Sbjct: 261 PTSTFEKMVHKIGMRRLKDL 280
>KYP43701.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 264
Score = 367 bits (943), Expect = e-126, Method: Compositional matrix adjust.
Identities = 172/261 (65%), Positives = 209/261 (80%), Gaps = 2/261 (0%)
Query: 1 MVVRSLDIKKDPYRPKEDNEAILGPEVPYLSAIGALLYLAQCTRPDISFAVNLLARFSSA 60
MVVRSLD+ KDP+RP+E +E ILGPEVPYLSAIGAL+YLA TRPDI+FAVNLLAR+SS+
Sbjct: 1 MVVRSLDVNKDPFRPQEKDEEILGPEVPYLSAIGALMYLANYTRPDIAFAVNLLARYSSS 60
Query: 61 PTKQHMMGVKHILRYLRGTTDMGLFYSKNSSDGSQVIGYTDAGYLSDPHKRILQTGYVFT 120
PT++H GVK ILRYLRGT DMGL YS S ++ GY DAGYLSDPH QTGY+FT
Sbjct: 61 PTRRHWNGVKQILRYLRGTMDMGLLYSNVSK--PELNGYADAGYLSDPHNGKSQTGYLFT 118
Query: 121 SGGTAFSWRSSKQSMPATSSNHSEIIALREATRECVWLRSIISHIRFSCDLPGITKSPTI 180
SGGTA SWRS KQ++ ATSSNH+EI+AL EA+RECVWLRS+I HIR +C L + T+
Sbjct: 119 SGGTAISWRSVKQTISATSSNHAEILALHEASRECVWLRSVIQHIRETCGLSSGKMTSTV 178
Query: 181 IYEDNAACIAQINEGYIKCDRTKHISPKLFFSHHLPKNGEIDIQKIQSCENYADLFTKSL 240
IYEDNAACIAQ+ +GYIK DRTKHI PK FF+H L +NG+I++Q+++S +N ADLFTKSL
Sbjct: 179 IYEDNAACIAQLKDGYIKGDRTKHILPKFFFTHDLQRNGDINVQQVRSSDNLADLFTKSL 238
Query: 241 PTTTFRKLVQSIGMRSLNNLM 261
P F +L+ IG+R L + M
Sbjct: 239 PRKVFEQLIHKIGLRRLKDCM 259
>CAN60706.1 hypothetical protein VITISV_043852 [Vitis vinifera]
Length = 805
Score = 379 bits (972), Expect = e-123, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 214/262 (81%), Gaps = 2/262 (0%)
Query: 1 MVVRSLDIKKDPYRPKEDNEAILGPEVPYLSAIGALLYLAQCTRPDISFAVNLLARFSSA 60
+VVRSLD+KKDP+RP E +E +LGPEVPYLSAI AL+YLA CTR DI+F+VNLLAR+SSA
Sbjct: 537 IVVRSLDVKKDPFRPCEKDEELLGPEVPYLSAISALMYLANCTRSDIAFSVNLLARYSSA 596
Query: 61 PTKQHMMGVKHILRYLRGTTDMGLFYSKNSSDGSQVIGYTDAGYLSDPHKRILQTGYVFT 120
PT++H G+KHILRYLRGTTDMGLFYSK S Q++ Y DAGYLSDPHK QTGYVF
Sbjct: 597 PTRRHWNGIKHILRYLRGTTDMGLFYSKESK--QQLLRYADAGYLSDPHKGRSQTGYVFN 654
Query: 121 SGGTAFSWRSSKQSMPATSSNHSEIIALREATRECVWLRSIISHIRFSCDLPGITKSPTI 180
GTA SWRS KQ+M ATSSNHSEI+A+ EA+REC+WLRS+I HIR SC L I PT
Sbjct: 655 CNGTAISWRSVKQTMVATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSSIKGDPTT 714
Query: 181 IYEDNAACIAQINEGYIKCDRTKHISPKLFFSHHLPKNGEIDIQKIQSCENYADLFTKSL 240
++EDN+ACIAQI GYIK DRTKHISPK F++H L K+GEID+Q+I+S +N ADLFTKSL
Sbjct: 715 LFEDNSACIAQITGGYIKGDRTKHISPKFFYTHELQKSGEIDVQQIRSSDNLADLFTKSL 774
Query: 241 PTTTFRKLVQSIGMRSLNNLMM 262
T+TF+KL+ IGMR L ++ M
Sbjct: 775 STSTFKKLIHRIGMRQLKDIDM 796