BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0480.1
(228 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007049973.1 DNA/RNA polymerases superfamily protein [Theobrom... 187 5e-51
XP_015159078.1 PREDICTED: uncharacterized protein LOC107058188, ... 163 8e-45
XP_017621985.1 PREDICTED: uncharacterized protein LOC108466135 [... 155 3e-43
>XP_007049973.1 DNA/RNA polymerases superfamily protein [Theobroma cacao] EOX94130.1
DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1401
Score = 187 bits (475), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 142/251 (56%), Gaps = 39/251 (15%)
Query: 3 DNRFRYRGKLFVLANPVLRRDILDEAHRSKYTGHLGGNKMCKDLKSLYWSSAMKRDVSEY 62
D RY +L+VL LRR+IL+EAH + Y H G KM +DLK +YW +KRDV+E+
Sbjct: 1003 DGVLRYGTRLYVLDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEF 1062
Query: 63 VRKCNVCQLMKAENRHLLGLLELLPIPEWKLENILMEVITGLPRSSRAFGAIW------- 115
V KC VCQ +KAE++ GLL+ LP+P+WK E+I M+ +TG PR+S + +IW
Sbjct: 1063 VSKCLVCQQVKAEHQKPAGLLQPLPVPKWKWEHIAMDFVTGFPRTSGGYDSIWIVVDRLT 1122
Query: 116 ----------------------DISVRSEG-------DVLLKECP---STKLADHLPSVE 143
D VR G + +L+ C + +LP VE
Sbjct: 1123 KSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISITLEDMLRACVIDLGVRWEQYLPLVE 1182
Query: 144 FAYNNSYQSSIDMSPFVTLCGKPCQSPLCWAEAEDAKLEGPEVTQDTSEKIALVRCRLQA 203
FAYNNS+Q+SI M+PF L G+ C+SP+ W E + KL GPE+ QD +EKI ++R ++
Sbjct: 1183 FAYNNSFQTSIQMAPFEALYGRICRSPIGWLEVGERKLFGPELVQDATEKIHMIRQKMLT 1242
Query: 204 TQSHQESMLTN 214
QS ++S N
Sbjct: 1243 AQSREKSYADN 1253
>XP_015159078.1 PREDICTED: uncharacterized protein LOC107058188, partial [Solanum
tuberosum]
Length = 400
Score = 163 bits (412), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 19/212 (8%)
Query: 2 QDNRFRYRGKLFVLANPVLRRDILDEAHRSKYTGHLGGNKMCKDLKSLY-WSSAMKRDVS 60
+D Y+ +L + + L R +L+EAH S YT H GG KM + +K++ W +KRD++
Sbjct: 89 EDGVLFYQNRLCIPNDDNLIRKLLNEAHTSPYTMHPGGTKMYQTIKNIIGWEMGIKRDIA 148
Query: 61 EYVRKCNVCQLMKAENRHLLGLLELLPIPEWKLENILMEVITGLPRSSRAFGAIW----- 115
E++ KC VCQ +KAE++ L+GLL+ L I EWK E I M+ + GLPR+ R AIW
Sbjct: 149 EFISKCLVCQHLKAEHQVLVGLLQPLSIREWKWERITMDFVFGLPRTQRNHDAIWVIVDR 208
Query: 116 ------------DISVRSEGDVLLKECPSTKLADHLPSVEFAYNNSYQSSIDMSPFVTLC 163
D S+ ++ + E + +HL +EFAYNNS QSSI M P+ L
Sbjct: 209 LTKNAHFLAIRMDYSLEHLAELYINEIFEVR-DEHLALIEFAYNNSCQSSIGMPPYGALY 267
Query: 164 GKPCQSPLCWAEAEDAKLEGPEVTQDTSEKIA 195
G+ C++PLCW+EA + KL GPE+ Q T +K++
Sbjct: 268 GRKCRTPLCWSEAGERKLVGPEIVQQTEDKVS 299
>XP_017621985.1 PREDICTED: uncharacterized protein LOC108466135 [Gossypium
arboreum]
Length = 296
Score = 155 bits (393), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 125/206 (60%), Gaps = 5/206 (2%)
Query: 8 YRGKLFVLANPVLRRDILDEAHRSKYTGHLGGNKMCKDLKSLYWSSAMKRDVSEYVRKCN 67
+RG++++ + LR+ IL EAH S Y HLG NK+ +DL+ LYW +KR+V+EY+ KC
Sbjct: 62 FRGRVYMPRDHDLRQSILREAHNSLYAMHLGENKLYRDLRELYWWPGLKREVTEYMSKCL 121
Query: 68 VCQLMKAENRHLLGLLELLPIPEWKLENILMEVITGLPRSSRAFGAIWD---ISVRSEGD 124
CQ +KAE++ GLL+ + IP WK E +++ P R++ ++W I+VR
Sbjct: 122 TCQQVKAEHQLPSGLLQQVKIPLWKWERT--KILVSHPSYERSYMSLWVQDWITVRRFTL 179
Query: 125 VLLKECPSTKLADHLPSVEFAYNNSYQSSIDMSPFVTLCGKPCQSPLCWAEAEDAKLEGP 184
+ D+L +FAY+N+YQSSI M+P+ L G+ C++P CW E + ++ GP
Sbjct: 180 RRMGSLKGGSWEDYLSLAKFAYSNNYQSSIQMAPYEALYGRRCRTPTCWTELGERRILGP 239
Query: 185 EVTQDTSEKIALVRCRLQATQSHQES 210
E+ DT +K+ L+R RL+ Q+S
Sbjct: 240 ELISDTEDKVKLIRDRLKQASDRQKS 265