BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0490.1
(111 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007019780.1 CCHC-type integrase [Theobroma cacao] EOY17005.1 ... 149 4e-44
KYP59799.1 Retrovirus-related Pol polyprotein from transposon 17... 148 2e-43
XP_008790936.2 PREDICTED: uncharacterized protein LOC103707976 [... 157 3e-43
>XP_007019780.1 CCHC-type integrase [Theobroma cacao] EOY17005.1 CCHC-type
integrase [Theobroma cacao]
Length = 174
Score = 149 bits (377), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 70/102 (68%), Positives = 81/102 (79%)
Query: 6 VVYALRQLRPHERNYPTHNLELPTIVFTLKIQRHYLYGENFDRFTDHKSLIYLFSQKELN 65
+ YA RQL+ HE NYPTH+LEL +VF LKI RHYLYGE F+DHKSL YL +QKELN
Sbjct: 42 IAYASRQLKKHETNYPTHDLELAAVVFALKIWRHYLYGERCRIFSDHKSLKYLLTQKELN 101
Query: 66 MRQRRWLELIKDYDFMLRYHQGKANVVVDALSRQLSGIIATL 107
+RQRRWLELIKDYD ++ YH GKANVV DALSR+ S +ATL
Sbjct: 102 LRQRRWLELIKDYDLVIDYHPGKANVVADALSRKSSSSLATL 143
>KYP59799.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
cajan]
Length = 171
Score = 148 bits (373), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 69/94 (73%), Positives = 76/94 (80%)
Query: 6 VVYALRQLRPHERNYPTHNLELPTIVFTLKIQRHYLYGENFDRFTDHKSLIYLFSQKELN 65
V YA RQL+ HERNYPTH+LEL +VF LKI RHYLYG F F+DHKSL YLF QKELN
Sbjct: 7 VAYASRQLKNHERNYPTHDLELAAMVFALKIWRHYLYGARFSVFSDHKSLKYLFDQKELN 66
Query: 66 MRQRRWLELIKDYDFMLRYHQGKANVVVDALSRQ 99
MRQRRW+E +KDYDF L YH GKANVV DALSR+
Sbjct: 67 MRQRRWMEFLKDYDFQLMYHPGKANVVADALSRK 100
>XP_008790936.2 PREDICTED: uncharacterized protein LOC103707976 [Phoenix
dactylifera]
Length = 562
Score = 157 bits (397), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 73/106 (68%), Positives = 84/106 (79%)
Query: 6 VVYALRQLRPHERNYPTHNLELPTIVFTLKIQRHYLYGENFDRFTDHKSLIYLFSQKELN 65
+ YA RQL+P+E NYPTH+LEL +VF LKI RHYLYGE FTDHKSL YLF+QKELN
Sbjct: 115 ITYASRQLKPYEENYPTHDLELAAVVFALKIWRHYLYGETCQVFTDHKSLKYLFTQKELN 174
Query: 66 MRQRRWLELIKDYDFMLRYHQGKANVVVDALSRQLSGIIATLMKNQ 111
MRQRRWLEL+KDYD + YH GKANVV DALSR+ SG +A L+ Q
Sbjct: 175 MRQRRWLELLKDYDLSIYYHPGKANVVADALSRKSSGNVAALITTQ 220