BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0550.1
(82 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002865522.1 hypothetical protein ARALYDRAFT_917523 [Arabidops... 56 2e-07
>XP_002865522.1 hypothetical protein ARALYDRAFT_917523 [Arabidopsis lyrata subsp.
lyrata] EFH41781.1 hypothetical protein
ARALYDRAFT_917523 [Arabidopsis lyrata subsp. lyrata]
Length = 352
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 8 QTAEECECQAILRAMQWAAHLQIPHLHMESDNQNIIRCINEGGMSIDWQLEKFMDNIQNL 67
QT EE EC A++ A+Q + L H+ E DN NI+ INEGG+++ +L+ +M+ I
Sbjct: 239 QTIEEAECSALIWAIQASWALGYRHVEFEGDNANIVNLINEGGINL--RLKHYMEEIWQW 296
Query: 68 NRQFLSIKFTHISRD 82
F SIKFT R+
Sbjct: 297 RNMFNSIKFTFRHRE 311