BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0630.1
(224 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002447531.1 hypothetical protein SORBIDRAFT_06g002845 [Sorghu... 134 2e-32
BAT10468.1 Os10g0351414 [Oryza sativa Japonica Group] 127 1e-31
XP_010686872.1 PREDICTED: uncharacterized protein LOC104901027 [... 130 2e-31
>XP_002447531.1 hypothetical protein SORBIDRAFT_06g002845 [Sorghum bicolor]
Length = 993
Score = 134 bits (336), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 124/222 (55%), Gaps = 9/222 (4%)
Query: 4 NKNNLTEFITIPSIGRSGGLLLYWNADLHMNI----HFYSSNLIHATVTFPYADPWDIFF 59
N+ N+ + + + G+SGGL L W + + I + Y L ++T T ++ + +
Sbjct: 78 NRFNVLDAFVVQAQGQSGGLWLIWTQAVSITIIDHNYHYILALCNSTTT---SEQFGLVC 134
Query: 60 IYGPPNVRDKPRFWTSLLSRIQN-VTNPYCCIGDMNALLDQNEKWG-GHSNIPFMSSFKQ 117
IYG P+ R+ WT +L+ + N T P +GDMN L++ NEK G G ++I ++ F
Sbjct: 135 IYGDPHHRNTTTIWTRVLNFVVNHSTLPILAMGDMNELMNANEKCGSGKADIRRINMFCD 194
Query: 118 FVRDANLVDLGFNGPAFTWTNNKAIHHLTKKRLDRSLCDVTWLMRFPEAGVFHLPRYNSD 177
+V+ +DLG++GPA+TWTN + T +RLDR L + W M +P V+HLP SD
Sbjct: 195 YVKQCGFLDLGYSGPAYTWTNKRFSTTPTFQRLDRCLANAEWCMAYPRTTVYHLPMRRSD 254
Query: 178 HAPILLKLKVEGQPIKTITKFEIFWTKHEDYNRIFEDKWVQS 219
HAPIL L I +F+ +W +DY ++ ++ W++S
Sbjct: 255 HAPILTMLDSTRHHNNKIFRFKNWWLMEQDYMQVAKESWMKS 296
>BAT10468.1 Os10g0351414 [Oryza sativa Japonica Group]
Length = 380
Score = 127 bits (320), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 112/210 (53%), Gaps = 3/210 (1%)
Query: 13 TIPSIGRSGGLLLYWNADLHMNIHFYSSNLIHATVTFPYADP-WDIFFIYGPPNVRDKPR 71
+P SGGL L W+ D+ + I S N I A + + P +++ IYG P+ R
Sbjct: 61 VVPVDQASGGLWLMWDEDMDLTIVQSSINYILAYGVYKNSGPIFNLLCIYGDPSHRATSA 120
Query: 72 FWTSLLS-RIQNVTNPYCCIGDMNALLDQNEKWG-GHSNIPFMSSFKQFVRDANLVDLGF 129
W+ + S + + P C+GD+N ++ NEK+G N ++ FK V + L+D+G+
Sbjct: 121 MWSEISSFVVHSSHKPTFCMGDLNEIMHANEKYGLAPPNQNRINIFKHHVNNLGLMDMGY 180
Query: 130 NGPAFTWTNNKAIHHLTKKRLDRSLCDVTWLMRFPEAGVFHLPRYNSDHAPILLKLKVEG 189
NGPA+TW+N + L +RLDR L +V W +P V+HLP SDHAPI+ L +
Sbjct: 181 NGPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSDHAPIIAILNPKN 240
Query: 190 QPIKTITKFEIFWTKHEDYNRIFEDKWVQS 219
+ K FE +W D+N+ W+QS
Sbjct: 241 RRPKRSFMFENWWLLEPDFNQHAHSAWLQS 270
>XP_010686872.1 PREDICTED: uncharacterized protein LOC104901027 [Beta vulgaris
subsp. vulgaris]
Length = 1273
Score = 130 bits (328), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 115/225 (51%), Gaps = 11/225 (4%)
Query: 4 NKNNLTEFITIPSIGRSGGLLLYWNADLHMNIHFYSSNLIHATVTFPYADP-WDIFFIYG 62
N+ ++ + + S G SGG+ L+WN +L +++ ++S++ + A V +P W IYG
Sbjct: 12 NRCGFSDGLCLSSNGNSGGIGLWWN-ELDVSVIYFSAHHVLAVVLDDQKNPSWYAVGIYG 70
Query: 63 PPNVRDKPRFWTSLLSRIQNVTNPYCCIGDMNALLDQNEKWGGHSNIP----FMSSFKQF 118
P +K W L Q P GD N ++ EK GG +P M +F++
Sbjct: 71 WPEAGNKYMTWQLLRQLRQQCNLPLVFFGDFNEIVSLEEKEGG---VPRGERLMDAFREV 127
Query: 119 VRDANLVDLGFNGPAFTWTNNKAIHHLTKKRLDRSLCDVTWLMRFPEAGVFHLPRYNSDH 178
+ D + DLGFNG FTW + L ++RLDR L D W FP V HLPRY SDH
Sbjct: 128 IDDCGVKDLGFNGSRFTWQRGNSPSTLIRERLDRMLADDEWCDLFPSWEVVHLPRYRSDH 187
Query: 179 APILLKLKVEGQPIK--TITKFEIFWTKHEDYNRIFEDKWVQSEG 221
AP+LLK V Q + + KFE W +D + ++ W +S G
Sbjct: 188 APLLLKTGVNDQFRRRNKLFKFEAMWLSQDDCATVVKEAWSESSG 232